Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKNOX1P55347 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PKNOX1P55347 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.78■□□□□ 0.76
PKNOX1P55347 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PKNOX1P55347 AC007322.3-201ENST00000426526 701 ntBASIC19.78■□□□□ 0.76
PKNOX1P55347 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.78■□□□□ 0.76
PKNOX1P55347 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PKNOX1P55347 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PKNOX1P55347 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.78■□□□□ 0.76
PKNOX1P55347 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PKNOX1P55347 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKNOX1P55347 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PKNOX1P55347 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PKNOX1P55347 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PKNOX1P55347 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.77■□□□□ 0.76
PKNOX1P55347 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKNOX1P55347 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.77■□□□□ 0.76
PKNOX1P55347 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.77■□□□□ 0.75
PKNOX1P55347 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
PKNOX1P55347 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKNOX1P55347 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
PKNOX1P55347 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
PKNOX1P55347 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
PKNOX1P55347 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.76■□□□□ 0.75
PKNOX1P55347 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
PKNOX1P55347 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PKNOX1P55347 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.76■□□□□ 0.75
PKNOX1P55347 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.76■□□□□ 0.75
PKNOX1P55347 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PKNOX1P55347 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 KRT19P1-201ENST00000405746 1186 ntBASIC19.76■□□□□ 0.75
PKNOX1P55347 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.76■□□□□ 0.75
PKNOX1P55347 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PKNOX1P55347 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKNOX1P55347 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.75■□□□□ 0.75
PKNOX1P55347 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.75■□□□□ 0.75
PKNOX1P55347 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.75■□□□□ 0.75
PKNOX1P55347 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.75■□□□□ 0.75
PKNOX1P55347 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.75■□□□□ 0.75
PKNOX1P55347 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.75■□□□□ 0.75
PKNOX1P55347 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
PKNOX1P55347 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX1P55347 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 SMG8-203ENST00000578922 2178 ntBASIC19.74■□□□□ 0.75
PKNOX1P55347 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PKNOX1P55347 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PKNOX1P55347 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.74■□□□□ 0.75
PKNOX1P55347 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX1P55347 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.74■□□□□ 0.75
PKNOX1P55347 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.74■□□□□ 0.75
PKNOX1P55347 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.74■□□□□ 0.75
PKNOX1P55347 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX1P55347 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX1P55347 KRT8P36-201ENST00000489121 1440 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms