Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDH8P55286 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH8P55286 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.6■■□□□ 1.05
CDH8P55286 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.6■■□□□ 1.05
CDH8P55286 AC020907.5-201ENST00000624372 1936 ntBASIC21.6■■□□□ 1.05
CDH8P55286 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH8P55286 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH8P55286 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH8P55286 AP005212.1-201ENST00000581547 1997 ntBASIC21.59■■□□□ 1.05
CDH8P55286 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH8P55286 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDH8P55286 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH8P55286 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH8P55286 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.59■■□□□ 1.05
CDH8P55286 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.59■■□□□ 1.05
CDH8P55286 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH8P55286 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH8P55286 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.59■■□□□ 1.05
CDH8P55286 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH8P55286 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH8P55286 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH8P55286 LINC01006-201ENST00000333319 2292 ntBASIC21.59■■□□□ 1.05
CDH8P55286 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH8P55286 DPP3P2-201ENST00000416030 1696 ntBASIC21.59■■□□□ 1.05
CDH8P55286 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH8P55286 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDH8P55286 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.58■■□□□ 1.05
CDH8P55286 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CDH8P55286 SMG8-203ENST00000578922 2178 ntBASIC21.58■■□□□ 1.05
CDH8P55286 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH8P55286 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.58■■□□□ 1.05
CDH8P55286 RNA5SP413-201ENST00000516373 109 ntBASIC21.58■■□□□ 1.05
CDH8P55286 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDH8P55286 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.58■■□□□ 1.04
CDH8P55286 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH8P55286 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.58■■□□□ 1.04
CDH8P55286 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDH8P55286 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDH8P55286 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CDH8P55286 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH8P55286 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH8P55286 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.57■■□□□ 1.04
CDH8P55286 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CDH8P55286 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.57■■□□□ 1.04
CDH8P55286 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH8P55286 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH8P55286 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH8P55286 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CDH8P55286 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH8P55286 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH8P55286 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH8P55286 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH8P55286 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH8P55286 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 CD99P1-205ENST00000527459 561 ntBASIC21.55■■□□□ 1.04
CDH8P55286 HLA-B-256ENST00000639848 1089 ntBASIC21.55■■□□□ 1.04
CDH8P55286 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms