Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
APOC4P55056 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC4P55056 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC4P55056 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC4P55056 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
APOC4P55056 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC4P55056 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.82□□□□□ -0.04
APOC4P55056 AC005829.2-201ENST00000571422 1056 ntBASIC14.82□□□□□ -0.04
APOC4P55056 AC008687.6-201ENST00000596318 630 ntBASIC14.82□□□□□ -0.04
APOC4P55056 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC4P55056 AC073648.6-201ENST00000641589 218 ntBASIC14.82□□□□□ -0.04
APOC4P55056 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC4P55056 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC4P55056 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC4P55056 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC4P55056 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC4P55056 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOC4P55056 PRORSD1P-201ENST00000295112 541 ntBASIC14.81□□□□□ -0.04
APOC4P55056 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOC4P55056 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC4P55056 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.81□□□□□ -0.04
APOC4P55056 POM121L13P-201ENST00000422362 380 ntBASIC14.81□□□□□ -0.04
APOC4P55056 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.81□□□□□ -0.04
APOC4P55056 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC4P55056 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC4P55056 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC4P55056 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOC4P55056 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOC4P55056 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC4P55056 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APOC4P55056 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC4P55056 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC4P55056 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
APOC4P55056 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOC4P55056 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOC4P55056 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOC4P55056 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 HLA-G-202ENST00000376815 851 ntBASIC14.8□□□□□ -0.04
APOC4P55056 HLA-G-203ENST00000376818 1127 ntBASIC14.8□□□□□ -0.04
APOC4P55056 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC4P55056 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.8□□□□□ -0.04
APOC4P55056 AC023632.3-201ENST00000521633 145 ntBASIC14.8□□□□□ -0.04
APOC4P55056 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 AC142381.4-202ENST00000563973 229 ntBASIC14.8□□□□□ -0.04
APOC4P55056 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC4P55056 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC4P55056 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC4P55056 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms