Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 IRA1YBR140C 9279 nt1.83□□□□□ -2.12
SUB1P54000 CFT1YDR301W 4074 nt1.83□□□□□ -2.12
SUB1P54000 YGL239CYGL239C 315 nt1.83□□□□□ -2.12
SUB1P54000 RKM1YPL208W 1752 nt1.82□□□□□ -2.12
SUB1P54000 MVP1YMR004W 1536 nt1.82□□□□□ -2.12
SUB1P54000 YDR003W-AYDR003W-A 123 nt1.82□□□□□ -2.12
SUB1P54000 YOP1YPR028W 543 nt1.82□□□□□ -2.12
SUB1P54000 MLH3YPL164C 2148 nt1.82□□□□□ -2.12
SUB1P54000 NUT1YGL151W 3399 nt1.81□□□□□ -2.12
SUB1P54000 DCP2YNL118C 2913 nt1.81□□□□□ -2.12
SUB1P54000 DNF3YMR162C 4971 nt1.81□□□□□ -2.12
SUB1P54000 MTC7YEL033W 420 nt1.81□□□□□ -2.12
SUB1P54000 EMP24YGL200C 612 nt1.81□□□□□ -2.12
SUB1P54000 HIT1YJR055W 495 nt1.81□□□□□ -2.12
SUB1P54000 YLR269CYLR269C 351 nt1.81□□□□□ -2.12
SUB1P54000 PIK1YNL267W 3201 nt1.81□□□□□ -2.12
SUB1P54000 SPO23YBR250W 1572 nt1.81□□□□□ -2.12
SUB1P54000 RPF1YHR088W 888 nt1.8□□□□□ -2.12
SUB1P54000 URM1YIL008W 300 nt1.8□□□□□ -2.12
SUB1P54000 YJL015CYJL015C 285 nt1.8□□□□□ -2.12
SUB1P54000 YOR161W-BYOR161W-B 261 nt1.8□□□□□ -2.12
SUB1P54000 YOR376WYOR376W 369 nt1.8□□□□□ -2.12
SUB1P54000 YOR192C-AYOR192C-A 1317 nt1.8□□□□□ -2.12
SUB1P54000 YHR125WYHR125W 306 nt1.79□□□□□ -2.12
SUB1P54000 NFU1YKL040C 771 nt1.79□□□□□ -2.12
SUB1P54000 FAB1YFR019W 6837 nt1.79□□□□□ -2.12
SUB1P54000 YEL057CYEL057C 702 nt1.78□□□□□ -2.12
SUB1P54000 BI2Q0110 1272 nt1.78□□□□□ -2.12
SUB1P54000 YGR290WYGR290W 444 nt1.78□□□□□ -2.12
SUB1P54000 YLR146W-AYLR146W-A 189 nt1.78□□□□□ -2.12
SUB1P54000 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
SUB1P54000 YSY6YBR162W-A 198 nt1.78□□□□□ -2.12
SUB1P54000 ZIP1YDR285W 2628 nt1.78□□□□□ -2.12
SUB1P54000 DAD4YDR320C-A 219 nt1.77□□□□□ -2.13
SUB1P54000 YHR139C-AYHR139C-A 312 nt1.77□□□□□ -2.13
SUB1P54000 NBL1YHR199C-A 222 nt1.77□□□□□ -2.13
SUB1P54000 YOR392WYOR392W 444 nt1.77□□□□□ -2.13
SUB1P54000 SEC21YNL287W 2808 nt1.76□□□□□ -2.13
SUB1P54000 LYS14YDR034C 2373 nt1.76□□□□□ -2.13
SUB1P54000 YDR114CYDR114C 303 nt1.76□□□□□ -2.13
SUB1P54000 PAU2YEL049W 363 nt1.76□□□□□ -2.13
SUB1P54000 RPL32YBL092W 393 nt1.76□□□□□ -2.13
SUB1P54000 YPL182CYPL182C 384 nt1.76□□□□□ -2.13
SUB1P54000 MKT1YNL085W 2493 nt1.76□□□□□ -2.13
SUB1P54000 FIG2YCR089W 4830 nt1.75□□□□□ -2.13
SUB1P54000 AIM29YKR074W 468 nt1.75□□□□□ -2.13
SUB1P54000 TIM18YOR297C 579 nt1.75□□□□□ -2.13
SUB1P54000 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
SUB1P54000 PXA2YKL188C 2562 nt1.75□□□□□ -2.13
SUB1P54000 PEX8YGR077C 1770 nt1.75□□□□□ -2.13
SUB1P54000 AZF1YOR113W 2745 nt1.74□□□□□ -2.13
SUB1P54000 YER087C-AYER087C-A 552 nt1.74□□□□□ -2.13
SUB1P54000 RRT15YLR162W-A 189 nt1.74□□□□□ -2.13
SUB1P54000 LOA1YPR139C 903 nt1.74□□□□□ -2.13
SUB1P54000 snR54snR54 86 nt1.74□□□□□ -2.13
SUB1P54000 PIG1YLR273C 1947 nt1.74□□□□□ -2.13
SUB1P54000 SGO1YOR073W 1773 nt1.73□□□□□ -2.13
SUB1P54000 RTR1YER139C 681 nt1.73□□□□□ -2.13
SUB1P54000 YGL217CYGL217C 342 nt1.73□□□□□ -2.13
SUB1P54000 YHL009W-AYHL009W-A 1242 nt1.73□□□□□ -2.13
SUB1P54000 YLR171WYLR171W 390 nt1.73□□□□□ -2.13
SUB1P54000 YBR174CYBR174C 315 nt1.73□□□□□ -2.13
SUB1P54000 SMC4YLR086W 4257 nt1.73□□□□□ -2.13
SUB1P54000 RSM22YKL155C 1887 nt1.72□□□□□ -2.13
SUB1P54000 YER076W-AYER076W-A 348 nt1.72□□□□□ -2.13
SUB1P54000 RUF22RUF22 515 nt1.72□□□□□ -2.13
SUB1P54000 MUK1YPL070W 1839 nt1.72□□□□□ -2.13
SUB1P54000 PMD1YER132C 5262 nt1.72□□□□□ -2.13
SUB1P54000 ENV11YGR071C 2583 nt1.72□□□□□ -2.13
SUB1P54000 VPS54YDR027C 2670 nt1.72□□□□□ -2.13
SUB1P54000 GUP1YGL084C 1683 nt1.71□□□□□ -2.14
SUB1P54000 FYV7YLR068W 456 nt1.71□□□□□ -2.14
SUB1P54000 YMR153C-AYMR153C-A 336 nt1.71□□□□□ -2.14
SUB1P54000 RAD50YNL250W 3939 nt1.7□□□□□ -2.14
SUB1P54000 SLX4YLR135W 2247 nt1.7□□□□□ -2.14
SUB1P54000 YIL066W-AYIL066W-A 444 nt1.7□□□□□ -2.14
SUB1P54000 ROM2YLR371W 4071 nt1.7□□□□□ -2.14
SUB1P54000 SWI4YER111C 3282 nt1.69□□□□□ -2.14
SUB1P54000 SWI6YLR182W 2412 nt1.69□□□□□ -2.14
SUB1P54000 YDL211CYDL211C 1119 nt1.69□□□□□ -2.14
SUB1P54000 YEL030C-AYEL030C-A 315 nt1.69□□□□□ -2.14
SUB1P54000 FYV8YGR196C 2454 nt1.68□□□□□ -2.14
SUB1P54000 GDS1YOR355W 1569 nt1.68□□□□□ -2.14
SUB1P54000 BPH1YCR032W 6504 nt1.68□□□□□ -2.14
SUB1P54000 PHS1YJL097W 654 nt1.68□□□□□ -2.14
SUB1P54000 ZEO1YOL109W 342 nt1.68□□□□□ -2.14
SUB1P54000 ERP4YOR016C 624 nt1.68□□□□□ -2.14
SUB1P54000 SEC5YDR166C 2916 nt1.68□□□□□ -2.14
SUB1P54000 KIP1YBL063W 3336 nt1.68□□□□□ -2.14
SUB1P54000 SRP14YDL092W 441 nt1.67□□□□□ -2.14
SUB1P54000 ECL1YGR146C 636 nt1.67□□□□□ -2.14
SUB1P54000 RPL9BYNL067W 576 nt1.67□□□□□ -2.14
SUB1P54000 PET127YOR017W 2403 nt1.67□□□□□ -2.14
SUB1P54000 YLL054CYLL054C 2532 nt1.67□□□□□ -2.14
SUB1P54000 RFX1YLR176C 2436 nt1.66□□□□□ -2.14
SUB1P54000 PRE4YFR050C 801 nt1.66□□□□□ -2.14
SUB1P54000 YPR063CYPR063C 423 nt1.66□□□□□ -2.14
SUB1P54000 NOC3YLR002C 1992 nt1.65□□□□□ -2.14
SUB1P54000 NST1YNL091W 3723 nt1.65□□□□□ -2.15
SUB1P54000 YBP1YBR216C 2025 nt1.65□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 58.1 ms