Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNF165-205ENST00000588679 2904 ntBASIC19.31■□□□□ 0.68
POLR2JP52435 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR2JP52435 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 AC091799.1-201ENST00000422823 811 ntBASIC19.31■□□□□ 0.68
POLR2JP52435 AC007322.3-201ENST00000426526 701 ntBASIC19.31■□□□□ 0.68
POLR2JP52435 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR2JP52435 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 KRT18P20-201ENST00000548986 1279 ntBASIC19.31■□□□□ 0.68
POLR2JP52435 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.31■□□□□ 0.68
POLR2JP52435 AL139246.5-201ENST00000606645 996 ntBASIC19.31■□□□□ 0.68
POLR2JP52435 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR2JP52435 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR2JP52435 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR2JP52435 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 AL691432.2-201ENST00000607222 2038 ntBASIC19.3■□□□□ 0.68
POLR2JP52435 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
POLR2JP52435 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
POLR2JP52435 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR2JP52435 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR2JP52435 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR2JP52435 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR2JP52435 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 AC243732.1-201ENST00000612648 864 ntBASIC19.3■□□□□ 0.68
POLR2JP52435 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR2JP52435 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR2JP52435 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR2JP52435 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
POLR2JP52435 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
POLR2JP52435 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
POLR2JP52435 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR2JP52435 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
POLR2JP52435 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.29■□□□□ 0.68
POLR2JP52435 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR2JP52435 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR2JP52435 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR2JP52435 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR2JP52435 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.28■□□□□ 0.68
POLR2JP52435 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
POLR2JP52435 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
POLR2JP52435 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.28■□□□□ 0.68
POLR2JP52435 RBM17P2-201ENST00000616397 1405 ntBASIC19.28■□□□□ 0.68
POLR2JP52435 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
POLR2JP52435 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.28■□□□□ 0.68
POLR2JP52435 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.28■□□□□ 0.68
POLR2JP52435 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR2JP52435 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2JP52435 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
POLR2JP52435 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2JP52435 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.68
POLR2JP52435 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms