Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MECP2P51608 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MECP2P51608 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MECP2P51608 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
MECP2P51608 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MECP2P51608 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
MECP2P51608 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MECP2P51608 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MECP2P51608 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.2■□□□□ 0.34
MECP2P51608 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.2■□□□□ 0.34
MECP2P51608 OR2I1P-207ENST00000453522 948 ntBASIC17.2■□□□□ 0.34
MECP2P51608 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.2■□□□□ 0.34
MECP2P51608 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 BX005040.4-201ENST00000637145 1518 ntBASIC17.2■□□□□ 0.34
MECP2P51608 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MECP2P51608 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MECP2P51608 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.19■□□□□ 0.34
MECP2P51608 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MECP2P51608 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.19■□□□□ 0.34
MECP2P51608 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 NEFHP1-201ENST00000412845 2629 ntBASIC17.19■□□□□ 0.34
MECP2P51608 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 AC093484.2-201ENST00000580996 2166 ntBASIC17.19■□□□□ 0.34
MECP2P51608 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.19■□□□□ 0.34
MECP2P51608 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
MECP2P51608 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MECP2P51608 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MECP2P51608 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 AC005082.1-201ENST00000413042 2259 ntBASIC17.18■□□□□ 0.34
MECP2P51608 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.18■□□□□ 0.34
MECP2P51608 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.18■□□□□ 0.34
MECP2P51608 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.18■□□□□ 0.34
MECP2P51608 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MECP2P51608 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.18■□□□□ 0.34
MECP2P51608 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
MECP2P51608 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.18■□□□□ 0.34
MECP2P51608 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.18■□□□□ 0.34
MECP2P51608 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.18■□□□□ 0.34
MECP2P51608 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MECP2P51608 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MECP2P51608 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.17■□□□□ 0.34
MECP2P51608 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MECP2P51608 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.17■□□□□ 0.34
MECP2P51608 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MECP2P51608 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.17■□□□□ 0.34
MECP2P51608 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 MIR3181-201ENST00000578512 73 ntBASIC17.17■□□□□ 0.34
MECP2P51608 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MECP2P51608 TMEM179-206ENST00000616017 1645 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms