Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.06□□□□□ -0.16
PCP4P48539 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
PCP4P48539 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.05□□□□□ -0.16
PCP4P48539 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
PCP4P48539 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCP4P48539 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCP4P48539 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCP4P48539 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.05□□□□□ -0.16
PCP4P48539 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.05□□□□□ -0.16
PCP4P48539 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.05□□□□□ -0.16
PCP4P48539 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PCP4P48539 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCP4P48539 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.04□□□□□ -0.16
PCP4P48539 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.04□□□□□ -0.16
PCP4P48539 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.04□□□□□ -0.16
PCP4P48539 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCP4P48539 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.04□□□□□ -0.16
PCP4P48539 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.04□□□□□ -0.16
PCP4P48539 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.04□□□□□ -0.16
PCP4P48539 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCP4P48539 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
PCP4P48539 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 AC012317.2-201ENST00000623305 2251 ntBASIC14.03□□□□□ -0.16
PCP4P48539 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCP4P48539 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PCP4P48539 AC104581.4-201ENST00000623126 3052 ntBASIC14.03□□□□□ -0.16
PCP4P48539 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PCP4P48539 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 GABARAPL3-202ENST00000624044 1851 ntBASIC14.03□□□□□ -0.16
PCP4P48539 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.03□□□□□ -0.16
PCP4P48539 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.03□□□□□ -0.16
PCP4P48539 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PCP4P48539 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4P48539 AIRN-201ENST00000601203 4374 ntBASIC14.02□□□□□ -0.16
PCP4P48539 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PCP4P48539 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms