Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 CMS1YLR003C 876 nt0.36□□□□□ -2.35
LSM8P47093 YPL080CYPL080C 327 nt0.36□□□□□ -2.35
LSM8P47093 MKT1YNL085W 2493 nt0.36□□□□□ -2.35
LSM8P47093 AIM44YPL158C 2277 nt0.35□□□□□ -2.35
LSM8P47093 YHR050W-AYHR050W-A 171 nt0.35□□□□□ -2.35
LSM8P47093 PAC1YOR269W 1485 nt0.35□□□□□ -2.35
LSM8P47093 VPS52YDR484W 1926 nt0.34□□□□□ -2.35
LSM8P47093 SAG1YJR004C 1953 nt0.34□□□□□ -2.35
LSM8P47093 SWI5YDR146C 2130 nt0.34□□□□□ -2.35
LSM8P47093 AI5_ALPHAQ0070 1893 nt0.34□□□□□ -2.36
LSM8P47093 YDR509WYDR509W 348 nt0.34□□□□□ -2.36
LSM8P47093 YML003WYML003W 873 nt0.34□□□□□ -2.36
LSM8P47093 IES4YOR189W 351 nt0.34□□□□□ -2.36
LSM8P47093 YPL039WYPL039W 951 nt0.34□□□□□ -2.36
LSM8P47093 PDE2YOR360C 1581 nt0.33□□□□□ -2.36
LSM8P47093 ALG13YGL047W 609 nt0.33□□□□□ -2.36
LSM8P47093 YGR270C-AYGR270C-A 219 nt0.33□□□□□ -2.36
LSM8P47093 SDH2YLL041C 801 nt0.33□□□□□ -2.36
LSM8P47093 SPR2YOR214C 711 nt0.33□□□□□ -2.36
LSM8P47093 SCW11YGL028C 1629 nt0.33□□□□□ -2.36
LSM8P47093 YDL152WYDL152W 366 nt0.32□□□□□ -2.36
LSM8P47093 YIL059CYIL059C 366 nt0.32□□□□□ -2.36
LSM8P47093 RPL37AYLR185W 267 nt0.32□□□□□ -2.36
LSM8P47093 YMR175W-AYMR175W-A 195 nt0.32□□□□□ -2.36
LSM8P47093 KAR1YNL188W 1302 nt0.32□□□□□ -2.36
LSM8P47093 snR79snR79 84 nt0.31□□□□□ -2.36
LSM8P47093 HNT1YDL125C 477 nt0.31□□□□□ -2.36
LSM8P47093 HTB1YDR224C 396 nt0.31□□□□□ -2.36
LSM8P47093 LOC1YFR001W 615 nt0.31□□□□□ -2.36
LSM8P47093 YGL063C-AYGL063C-A 150 nt0.31□□□□□ -2.36
LSM8P47093 YHR063W-AYHR063W-A 336 nt0.31□□□□□ -2.36
LSM8P47093 ACF4YJR083C 930 nt0.31□□□□□ -2.36
LSM8P47093 COX7YMR256C 183 nt0.31□□□□□ -2.36
LSM8P47093 YOR364WYOR364W 369 nt0.31□□□□□ -2.36
LSM8P47093 YLL007CYLL007C 1998 nt0.31□□□□□ -2.36
LSM8P47093 PXA2YKL188C 2562 nt0.3□□□□□ -2.36
LSM8P47093 TDA2YER071C 381 nt0.3□□□□□ -2.36
LSM8P47093 YBL068W-AYBL068W-A 237 nt0.3□□□□□ -2.36
LSM8P47093 DBP6YNR038W 1890 nt0.3□□□□□ -2.36
LSM8P47093 TTI1YKL033W 3117 nt0.3□□□□□ -2.36
LSM8P47093 PAN2YGL094C 3348 nt0.29□□□□□ -2.36
LSM8P47093 COX3Q0275 810 nt0.29□□□□□ -2.36
LSM8P47093 YER121WYER121W 345 nt0.28□□□□□ -2.36
LSM8P47093 YHR054CYHR054C 1065 nt0.28□□□□□ -2.36
LSM8P47093 YLR366WYLR366W 306 nt0.28□□□□□ -2.36
LSM8P47093 SNO3YFL060C 669 nt0.27□□□□□ -2.37
LSM8P47093 PRE4YFR050C 801 nt0.27□□□□□ -2.37
LSM8P47093 YHL037CYHL037C 402 nt0.27□□□□□ -2.37
LSM8P47093 tT(UGU)Q1tT(UGU)Q1 76 nt0.27□□□□□ -2.37
LSM8P47093 ABF2YMR072W 552 nt0.27□□□□□ -2.37
LSM8P47093 SNO2YNL334C 669 nt0.27□□□□□ -2.37
LSM8P47093 LYS14YDR034C 2373 nt0.27□□□□□ -2.37
LSM8P47093 ALY2YJL084C 3141 nt0.27□□□□□ -2.37
LSM8P47093 YEL057CYEL057C 702 nt0.26□□□□□ -2.37
LSM8P47093 YHR139C-AYHR139C-A 312 nt0.26□□□□□ -2.37
LSM8P47093 HIT1YJR055W 495 nt0.26□□□□□ -2.37
LSM8P47093 YMR304C-AYMR304C-A 351 nt0.26□□□□□ -2.37
LSM8P47093 YOL106WYOL106W 354 nt0.26□□□□□ -2.37
LSM8P47093 BFR2YDR299W 1605 nt0.26□□□□□ -2.37
LSM8P47093 WAR1YML076C 2835 nt0.26□□□□□ -2.37
LSM8P47093 MMS4YBR098W 2076 nt0.25□□□□□ -2.37
LSM8P47093 SLY1YDR189W 2001 nt0.25□□□□□ -2.37
LSM8P47093 YDR182W-AYDR182W-A 204 nt0.25□□□□□ -2.37
LSM8P47093 QCR7YDR529C 384 nt0.25□□□□□ -2.37
LSM8P47093 YPR147CYPR147C 915 nt0.25□□□□□ -2.37
LSM8P47093 YPR153WYPR153W 423 nt0.25□□□□□ -2.37
LSM8P47093 LCD1YDR499W 2244 nt0.25□□□□□ -2.37
LSM8P47093 YSP1YHR155W 3687 nt0.25□□□□□ -2.37
LSM8P47093 YGR042WYGR042W 816 nt0.24□□□□□ -2.37
LSM8P47093 GMC2YLR445W 567 nt0.24□□□□□ -2.37
LSM8P47093 YPR170CYPR170C 336 nt0.24□□□□□ -2.37
LSM8P47093 SPO23YBR250W 1572 nt0.23□□□□□ -2.37
LSM8P47093 UBP3YER151C 2739 nt0.23□□□□□ -2.37
LSM8P47093 RRI2YOL117W 1938 nt0.23□□□□□ -2.37
LSM8P47093 GEA2YEL022W 4380 nt0.23□□□□□ -2.37
LSM8P47093 YDR114CYDR114C 303 nt0.23□□□□□ -2.37
LSM8P47093 tC(GCA)BtC(GCA)B 72 nt0.23□□□□□ -2.37
LSM8P47093 tC(GCA)GtC(GCA)G 72 nt0.23□□□□□ -2.37
LSM8P47093 tC(GCA)P1tC(GCA)P1 72 nt0.23□□□□□ -2.37
LSM8P47093 tC(GCA)P2tC(GCA)P2 72 nt0.23□□□□□ -2.37
LSM8P47093 YJR140W-AYJR140W-A 150 nt0.23□□□□□ -2.37
LSM8P47093 GUP1YGL084C 1683 nt0.23□□□□□ -2.37
LSM8P47093 IPI3YNL182C 1668 nt0.23□□□□□ -2.37
LSM8P47093 PAN3YKL025C 2040 nt0.22□□□□□ -2.37
LSM8P47093 snR84snR84 550 nt0.22□□□□□ -2.37
LSM8P47093 YEL018C-AYEL018C-A 534 nt0.22□□□□□ -2.37
LSM8P47093 ISD11YER048W-A 285 nt0.22□□□□□ -2.37
LSM8P47093 UPS1YLR193C 528 nt0.22□□□□□ -2.37
LSM8P47093 SPC2YML055W 537 nt0.22□□□□□ -2.37
LSM8P47093 YPR099CYPR099C 357 nt0.22□□□□□ -2.37
LSM8P47093 CHS6YJL099W 2241 nt0.21□□□□□ -2.38
LSM8P47093 YDR008CYDR008C 351 nt0.21□□□□□ -2.38
LSM8P47093 MET32YDR253C 576 nt0.21□□□□□ -2.38
LSM8P47093 LRP1YHR081W 555 nt0.21□□□□□ -2.38
LSM8P47093 POL32YJR043C 1053 nt0.21□□□□□ -2.38
LSM8P47093 YBR121C-AYBR121C-A 159 nt0.21□□□□□ -2.38
LSM8P47093 ENV11YGR071C 2583 nt0.21□□□□□ -2.38
LSM8P47093 YER158W-AYER158W-A 216 nt0.2□□□□□ -2.38
LSM8P47093 YNL150WYNL150W 408 nt0.2□□□□□ -2.38
LSM8P47093 SLI15YBR156C 2097 nt0.19□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms