Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YPL150WYPL150W 2706 nt2.64□□□□□ -1.99
TY4A-JP47023 RGA1YOR127W 3024 nt2.64□□□□□ -1.99
TY4A-JP47023 RPL38YLR325C 237 nt2.64□□□□□ -1.99
TY4A-JP47023 RPL33AYPL143W 324 nt2.64□□□□□ -1.99
TY4A-JP47023 SWI6YLR182W 2412 nt2.64□□□□□ -1.99
TY4A-JP47023 YOR296WYOR296W 3870 nt2.64□□□□□ -1.99
TY4A-JP47023 MMS22YLR320W 4365 nt2.64□□□□□ -1.99
TY4A-JP47023 SMC6YLR383W 3345 nt2.63□□□□□ -1.99
TY4A-JP47023 YIL032CYIL032C 357 nt2.63□□□□□ -1.99
TY4A-JP47023 RPA34YJL148W 702 nt2.63□□□□□ -1.99
TY4A-JP47023 YML007C-AYML007C-A 111 nt2.63□□□□□ -1.99
TY4A-JP47023 PHO91YNR013C 2685 nt2.63□□□□□ -1.99
TY4A-JP47023 TOF1YNL273W 3717 nt2.63□□□□□ -1.99
TY4A-JP47023 MET18YIL128W 3099 nt2.62□□□□□ -1.99
TY4A-JP47023 snR70snR70 164 nt2.62□□□□□ -1.99
TY4A-JP47023 EMC6YLL014W 327 nt2.62□□□□□ -1.99
TY4A-JP47023 YOR008C-AYOR008C-A 225 nt2.62□□□□□ -1.99
TY4A-JP47023 RSE1YML049C 4086 nt2.62□□□□□ -1.99
TY4A-JP47023 GRR1YJR090C 3456 nt2.62□□□□□ -1.99
TY4A-JP47023 INO80YGL150C 4470 nt2.62□□□□□ -1.99
TY4A-JP47023 NPC2YDL046W 522 nt2.61□□□□□ -1.99
TY4A-JP47023 ALG13YGL047W 609 nt2.61□□□□□ -1.99
TY4A-JP47023 YLR146W-AYLR146W-A 189 nt2.61□□□□□ -1.99
TY4A-JP47023 JLP2YMR132C 627 nt2.61□□□□□ -1.99
TY4A-JP47023 AXL1YPR122W 3627 nt2.61□□□□□ -1.99
TY4A-JP47023 BUB1YGR188C 3066 nt2.61□□□□□ -1.99
TY4A-JP47023 VTC3YPL019C 2508 nt2.61□□□□□ -1.99
TY4A-JP47023 IRA2YOL081W 9240 nt2.6□□□□□ -1.99
TY4A-JP47023 SAP185YJL098W 3177 nt2.6□□□□□ -1.99
TY4A-JP47023 YDR426CYDR426C 378 nt2.6□□□□□ -1.99
TY4A-JP47023 PRE4YFR050C 801 nt2.6□□□□□ -1.99
TY4A-JP47023 YNL337WYNL337W 255 nt2.6□□□□□ -1.99
TY4A-JP47023 YPP1YGR198W 2454 nt2.6□□□□□ -1.99
TY4A-JP47023 RTT107YHR154W 3213 nt2.59□□□□□ -1.99
TY4A-JP47023 SLM1YIL105C 2061 nt2.59□□□□□ -1.99
TY4A-JP47023 RPL42BYHR141C 321 nt2.59□□□□□ -1.99
TY4A-JP47023 RPL42AYNL162W 321 nt2.59□□□□□ -1.99
TY4A-JP47023 snR49snR49 165 nt2.59□□□□□ -1.99
TY4A-JP47023 ZRG8YER033C 3231 nt2.59□□□□□ -1.99
TY4A-JP47023 VPS34YLR240W 2628 nt2.59□□□□□ -1.99
TY4A-JP47023 CSF1YLR087C 8877 nt2.59□□□□□ -2
TY4A-JP47023 RTT101YJL047C 2529 nt2.59□□□□□ -2
TY4A-JP47023 BLI1YKL061W 342 nt2.58□□□□□ -2
TY4A-JP47023 YKL183C-AYKL183C-A 213 nt2.58□□□□□ -2
TY4A-JP47023 YOR333CYOR333C 417 nt2.58□□□□□ -2
TY4A-JP47023 RAD61YDR014W 1944 nt2.58□□□□□ -2
TY4A-JP47023 CFT2YLR115W 2580 nt2.57□□□□□ -2
TY4A-JP47023 DBP10YDL031W 2988 nt2.57□□□□□ -2
TY4A-JP47023 CDC53YDL132W 2448 nt2.57□□□□□ -2
TY4A-JP47023 YER079C-AYER079C-A 339 nt2.57□□□□□ -2
TY4A-JP47023 KTI11YBL071W-A 249 nt2.57□□□□□ -2
TY4A-JP47023 DAD3YBR233W-A 285 nt2.57□□□□□ -2
TY4A-JP47023 SLY1YDR189W 2001 nt2.57□□□□□ -2
TY4A-JP47023 YGR250CYGR250C 2346 nt2.57□□□□□ -2
TY4A-JP47023 SET2YJL168C 2202 nt2.56□□□□□ -2
TY4A-JP47023 UPS1YLR193C 528 nt2.56□□□□□ -2
TY4A-JP47023 GIP3YPL137C 3831 nt2.56□□□□□ -2
TY4A-JP47023 NUT2YPR168W 474 nt2.56□□□□□ -2
TY4A-JP47023 COG8YML071C 1824 nt2.56□□□□□ -2
TY4A-JP47023 YMR046W-AYMR046W-A 129 nt2.55□□□□□ -2
TY4A-JP47023 YBL083CYBL083C 426 nt2.55□□□□□ -2
TY4A-JP47023 MGM1YOR211C 2646 nt2.55□□□□□ -2
TY4A-JP47023 MUK1YPL070W 1839 nt2.54□□□□□ -2
TY4A-JP47023 RPO41YFL036W 4056 nt2.54□□□□□ -2
TY4A-JP47023 YCR102W-AYCR102W-A 198 nt2.54□□□□□ -2
TY4A-JP47023 SPF1YEL031W 3648 nt2.54□□□□□ -2
TY4A-JP47023 VMR1YHL035C 4779 nt2.53□□□□□ -2
TY4A-JP47023 BUD2YKL092C 3315 nt2.53□□□□□ -2
TY4A-JP47023 snR60snR60 104 nt2.53□□□□□ -2
TY4A-JP47023 YDR406W-AYDR406W-A 246 nt2.53□□□□□ -2
TY4A-JP47023 YHR032W-AYHR032W-A 180 nt2.53□□□□□ -2
TY4A-JP47023 SDH2YLL041C 801 nt2.53□□□□□ -2
TY4A-JP47023 YPR063CYPR063C 423 nt2.53□□□□□ -2
TY4A-JP47023 snR43snR43 209 nt2.53□□□□□ -2
TY4A-JP47023 BCK1YJL095W 4437 nt2.53□□□□□ -2
TY4A-JP47023 TRL1YJL087C 2484 nt2.52□□□□□ -2.01
TY4A-JP47023 MLH1YMR167W 2310 nt2.52□□□□□ -2.01
TY4A-JP47023 NUP120YKL057C 3114 nt2.52□□□□□ -2.01
TY4A-JP47023 YDL062WYDL062W 426 nt2.52□□□□□ -2.01
TY4A-JP47023 CDC36YDL165W 576 nt2.52□□□□□ -2.01
TY4A-JP47023 SWI5YDR146C 2130 nt2.52□□□□□ -2.01
TY4A-JP47023 TRX1YLR043C 312 nt2.52□□□□□ -2.01
TY4A-JP47023 YPR002C-AYPR002C-A 198 nt2.52□□□□□ -2.01
TY4A-JP47023 SPO22YIL073C 2928 nt2.52□□□□□ -2.01
TY4A-JP47023 NEW1YPL226W 3591 nt2.51□□□□□ -2.01
TY4A-JP47023 FKS3YMR306W 5358 nt2.51□□□□□ -2.01
TY4A-JP47023 YNL114CYNL114C 372 nt2.51□□□□□ -2.01
TY4A-JP47023 YOL155W-AYOL155W-A 135 nt2.51□□□□□ -2.01
TY4A-JP47023 RPB10YOR210W 213 nt2.51□□□□□ -2.01
TY4A-JP47023 NAB6YML117W 3405 nt2.51□□□□□ -2.01
TY4A-JP47023 TFC8YPL007C 1767 nt2.51□□□□□ -2.01
TY4A-JP47023 BNI1YNL271C 5862 nt2.51□□□□□ -2.01
TY4A-JP47023 ARP7YPR034W 1434 nt2.51□□□□□ -2.01
TY4A-JP47023 NOP53YPL146C 1368 nt2.5□□□□□ -2.01
TY4A-JP47023 STB4YMR019W 2850 nt2.5□□□□□ -2.01
TY4A-JP47023 VPS8YAL002W 3825 nt2.5□□□□□ -2.01
TY4A-JP47023 ATG9YDL149W 2994 nt2.5□□□□□ -2.01
TY4A-JP47023 DCP2YNL118C 2913 nt2.49□□□□□ -2.01
TY4A-JP47023 RPH1YER169W 2391 nt2.49□□□□□ -2.01
TY4A-JP47023 YDR286CYDR286C 345 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms