Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 RKR1YMR247C 4689 nt0.45□□□□□ -2.34
LSM1P47017 YPR172WYPR172W 603 nt0.45□□□□□ -2.34
LSM1P47017 SET3YKR029C 2256 nt0.45□□□□□ -2.34
LSM1P47017 SWI6YLR182W 2412 nt0.45□□□□□ -2.34
LSM1P47017 YER023C-AYER023C-A 213 nt0.44□□□□□ -2.34
LSM1P47017 RPL22BYFL034C-A 369 nt0.44□□□□□ -2.34
LSM1P47017 ECM12YHR021W-A 456 nt0.44□□□□□ -2.34
LSM1P47017 YML009C-AYML009C-A 327 nt0.44□□□□□ -2.34
LSM1P47017 YOR199WYOR199W 330 nt0.44□□□□□ -2.34
LSM1P47017 HDA3YPR179C 1968 nt0.43□□□□□ -2.34
LSM1P47017 AIM44YPL158C 2277 nt0.43□□□□□ -2.34
LSM1P47017 DAD1YDR016C 285 nt0.43□□□□□ -2.34
LSM1P47017 SLM6YBR266C 453 nt0.43□□□□□ -2.34
LSM1P47017 YIL030W-AYIL030W-A 339 nt0.42□□□□□ -2.34
LSM1P47017 CMS1YLR003C 876 nt0.42□□□□□ -2.34
LSM1P47017 YBR032WYBR032W 303 nt0.42□□□□□ -2.34
LSM1P47017 YPL080CYPL080C 327 nt0.42□□□□□ -2.34
LSM1P47017 snR59snR59 78 nt0.41□□□□□ -2.34
LSM1P47017 YER038W-AYER038W-A 381 nt0.41□□□□□ -2.34
LSM1P47017 YPL119C-AYPL119C-A 264 nt0.41□□□□□ -2.34
LSM1P47017 APL2YKL135C 2181 nt0.4□□□□□ -2.34
LSM1P47017 SRP14YDL092W 441 nt0.4□□□□□ -2.35
LSM1P47017 IRC2YDR112W 309 nt0.4□□□□□ -2.35
LSM1P47017 DFG10YIL049W 762 nt0.4□□□□□ -2.35
LSM1P47017 ARV1YLR242C 966 nt0.4□□□□□ -2.35
LSM1P47017 LTE1YAL024C 4308 nt0.4□□□□□ -2.35
LSM1P47017 MDM32YOR147W 1869 nt0.39□□□□□ -2.35
LSM1P47017 SAG1YJR004C 1953 nt0.39□□□□□ -2.35
LSM1P47017 STO1YMR125W 2586 nt0.39□□□□□ -2.35
LSM1P47017 YDR003W-AYDR003W-A 123 nt0.39□□□□□ -2.35
LSM1P47017 SRB7YDR308C 423 nt0.39□□□□□ -2.35
LSM1P47017 YHR028W-AYHR028W-A 321 nt0.39□□□□□ -2.35
LSM1P47017 YMR175W-AYMR175W-A 195 nt0.39□□□□□ -2.35
LSM1P47017 IES4YOR189W 351 nt0.39□□□□□ -2.35
LSM1P47017 ATP20YPR020W 348 nt0.39□□□□□ -2.35
LSM1P47017 YOP1YPR028W 543 nt0.39□□□□□ -2.35
LSM1P47017 YMR160WYMR160W 2451 nt0.39□□□□□ -2.35
LSM1P47017 PAC1YOR269W 1485 nt0.38□□□□□ -2.35
LSM1P47017 ALG13YGL047W 609 nt0.38□□□□□ -2.35
LSM1P47017 YGR270C-AYGR270C-A 219 nt0.38□□□□□ -2.35
LSM1P47017 RUF22RUF22 515 nt0.38□□□□□ -2.35
LSM1P47017 ZIP1YDR285W 2628 nt0.38□□□□□ -2.35
LSM1P47017 YDR115WYDR115W 318 nt0.37□□□□□ -2.35
LSM1P47017 URM1YIL008W 300 nt0.37□□□□□ -2.35
LSM1P47017 PAN2YGL094C 3348 nt0.37□□□□□ -2.35
LSM1P47017 YDR509WYDR509W 348 nt0.36□□□□□ -2.35
LSM1P47017 YHR063W-AYHR063W-A 336 nt0.36□□□□□ -2.35
LSM1P47017 YIL059CYIL059C 366 nt0.36□□□□□ -2.35
LSM1P47017 SPR2YOR214C 711 nt0.36□□□□□ -2.35
LSM1P47017 FIG4YNL325C 2640 nt0.36□□□□□ -2.35
LSM1P47017 OST1YJL002C 1431 nt0.36□□□□□ -2.35
LSM1P47017 PDE2YOR360C 1581 nt0.36□□□□□ -2.35
LSM1P47017 SWI5YDR146C 2130 nt0.35□□□□□ -2.35
LSM1P47017 YER087C-AYER087C-A 552 nt0.35□□□□□ -2.35
LSM1P47017 YHR050W-AYHR050W-A 171 nt0.35□□□□□ -2.35
LSM1P47017 COX3Q0275 810 nt0.35□□□□□ -2.35
LSM1P47017 RPL37AYLR185W 267 nt0.35□□□□□ -2.35
LSM1P47017 MKT1YNL085W 2493 nt0.35□□□□□ -2.35
LSM1P47017 VPS52YDR484W 1926 nt0.34□□□□□ -2.35
LSM1P47017 OCA6YDR067C 675 nt0.34□□□□□ -2.36
LSM1P47017 SCW11YGL028C 1629 nt0.34□□□□□ -2.36
LSM1P47017 PXA2YKL188C 2562 nt0.34□□□□□ -2.36
LSM1P47017 SLD3YGL113W 2007 nt0.33□□□□□ -2.36
LSM1P47017 LYS14YDR034C 2373 nt0.33□□□□□ -2.36
LSM1P47017 YDL152WYDL152W 366 nt0.33□□□□□ -2.36
LSM1P47017 YEL057CYEL057C 702 nt0.33□□□□□ -2.36
LSM1P47017 YOR364WYOR364W 369 nt0.33□□□□□ -2.36
LSM1P47017 DBP6YNR038W 1890 nt0.33□□□□□ -2.36
LSM1P47017 GEA2YEL022W 4380 nt0.32□□□□□ -2.36
LSM1P47017 ALY2YJL084C 3141 nt0.32□□□□□ -2.36
LSM1P47017 FMP27YLR454W 7887 nt0.32□□□□□ -2.36
LSM1P47017 HTB1YDR224C 396 nt0.32□□□□□ -2.36
LSM1P47017 LOC1YFR001W 615 nt0.32□□□□□ -2.36
LSM1P47017 AI5_ALPHAQ0070 1893 nt0.31□□□□□ -2.36
LSM1P47017 ULP2YIL031W 3105 nt0.31□□□□□ -2.36
LSM1P47017 snR79snR79 84 nt0.31□□□□□ -2.36
LSM1P47017 HNT1YDL125C 477 nt0.31□□□□□ -2.36
LSM1P47017 ACF4YJR083C 930 nt0.31□□□□□ -2.36
LSM1P47017 YSP1YHR155W 3687 nt0.31□□□□□ -2.36
LSM1P47017 TDA2YER071C 381 nt0.3□□□□□ -2.36
LSM1P47017 YOL106WYOL106W 354 nt0.3□□□□□ -2.36
LSM1P47017 COG4YPR105C 2586 nt0.3□□□□□ -2.36
LSM1P47017 INA22YIR024C 651 nt0.29□□□□□ -2.36
LSM1P47017 YOR218CYOR218C 420 nt0.29□□□□□ -2.36
LSM1P47017 YPR147CYPR147C 915 nt0.29□□□□□ -2.36
LSM1P47017 KAR1YNL188W 1302 nt0.29□□□□□ -2.36
LSM1P47017 MMS4YBR098W 2076 nt0.28□□□□□ -2.36
LSM1P47017 tT(UGU)Q1tT(UGU)Q1 76 nt0.28□□□□□ -2.36
LSM1P47017 SDH2YLL041C 801 nt0.28□□□□□ -2.36
LSM1P47017 ABF2YMR072W 552 nt0.28□□□□□ -2.36
LSM1P47017 YBL068W-AYBL068W-A 237 nt0.28□□□□□ -2.36
LSM1P47017 YOR072W-AYOR072W-A 249 nt0.28□□□□□ -2.36
LSM1P47017 UTP20YBL004W 7482 nt0.28□□□□□ -2.37
LSM1P47017 IPI3YNL182C 1668 nt0.27□□□□□ -2.37
LSM1P47017 YDR114CYDR114C 303 nt0.27□□□□□ -2.37
LSM1P47017 ISD11YER048W-A 285 nt0.27□□□□□ -2.37
LSM1P47017 YJR140W-AYJR140W-A 150 nt0.27□□□□□ -2.37
LSM1P47017 SPC2YML055W 537 nt0.27□□□□□ -2.37
LSM1P47017 COX7YMR256C 183 nt0.27□□□□□ -2.37
LSM1P47017 RSM23YGL129C 1353 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 35.4 ms