Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC1A3P43003 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC1A3P43003 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC1A3P43003 AC231657.2-201ENST00000624556 255 ntBASIC18.57■□□□□ 0.56
SLC1A3P43003 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC1A3P43003 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC1A3P43003 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A3P43003 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC1A3P43003 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A3P43003 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A3P43003 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A3P43003 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC1A3P43003 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 AC068338.2-201ENST00000563278 1430 ntBASIC18.56■□□□□ 0.56
SLC1A3P43003 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC1A3P43003 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A3P43003 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A3P43003 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A3P43003 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC1A3P43003 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A3P43003 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A3P43003 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 AC092720.2-201ENST00000602388 1665 ntBASIC18.55■□□□□ 0.56
SLC1A3P43003 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC1A3P43003 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 PGM5P4-201ENST00000421970 445 ntBASIC18.55■□□□□ 0.56
SLC1A3P43003 AC016405.3-201ENST00000607710 860 ntBASIC18.55■□□□□ 0.56
SLC1A3P43003 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A3P43003 AL162377.1-201ENST00000618844 1793 ntBASIC18.55■□□□□ 0.56
SLC1A3P43003 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A3P43003 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A3P43003 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC1A3P43003 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 AC007322.1-201ENST00000426983 750 ntBASIC18.54■□□□□ 0.56
SLC1A3P43003 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC1A3P43003 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC1A3P43003 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SLC1A3P43003 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 KRT8P36-201ENST00000489121 1440 ntBASIC18.54■□□□□ 0.56
SLC1A3P43003 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 RNF165-205ENST00000588679 2904 ntBASIC18.54■□□□□ 0.56
SLC1A3P43003 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SLC1A3P43003 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
SLC1A3P43003 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A3P43003 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms