Protein–RNA interactions for Protein: P38883

RIX1, Pre-rRNA-processing protein RIX1, yeastyeast

Predicted RBP Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIX1P38883 SSE1YPL106C 2082 nt2.57□□□□□ -2
RIX1P38883 SSD1YDR293C 3753 nt2.57□□□□□ -2
RIX1P38883 UBP2YOR124C 3819 nt2.57□□□□□ -2
RIX1P38883 RLF2YPR018W 1821 nt2.57□□□□□ -2
RIX1P38883 QCR7YDR529C 384 nt2.57□□□□□ -2
RIX1P38883 YER189WYER189W 369 nt2.57□□□□□ -2
RIX1P38883 PCC1YKR095W-A 267 nt2.57□□□□□ -2
RIX1P38883 YLR120W-AYLR120W-A 102 nt2.57□□□□□ -2
RIX1P38883 YOR015WYOR015W 360 nt2.57□□□□□ -2
RIX1P38883 POM152YMR129W 4014 nt2.57□□□□□ -2
RIX1P38883 RBK1YCR036W 1002 nt2.56□□□□□ -2
RIX1P38883 RPS27AYKL156W 249 nt2.56□□□□□ -2
RIX1P38883 AFI1YOR129C 2682 nt2.56□□□□□ -2
RIX1P38883 AI5_ALPHAQ0070 1893 nt2.56□□□□□ -2
RIX1P38883 HDA3YPR179C 1968 nt2.56□□□□□ -2
RIX1P38883 DUG2YBR281C 2637 nt2.55□□□□□ -2
RIX1P38883 AGC1YPR021C 2709 nt2.55□□□□□ -2
RIX1P38883 RSE1YML049C 4086 nt2.55□□□□□ -2
RIX1P38883 POL3YDL102W 3294 nt2.55□□□□□ -2
RIX1P38883 PUF4YGL014W 2667 nt2.55□□□□□ -2
RIX1P38883 CSE2YNR010W 450 nt2.55□□□□□ -2
RIX1P38883 USO1YDL058W 5373 nt2.54□□□□□ -2
RIX1P38883 LSO2YGR169C-A 279 nt2.54□□□□□ -2
RIX1P38883 YHR071C-AYHR071C-A 321 nt2.54□□□□□ -2
RIX1P38883 YIL059CYIL059C 366 nt2.54□□□□□ -2
RIX1P38883 UPS1YLR193C 528 nt2.54□□□□□ -2
RIX1P38883 MDM20YOL076W 2391 nt2.54□□□□□ -2
RIX1P38883 FIR1YER032W 2631 nt2.54□□□□□ -2
RIX1P38883 KSP1YHR082C 3090 nt2.53□□□□□ -2
RIX1P38883 IRA2YOL081W 9240 nt2.53□□□□□ -2
RIX1P38883 NCL1YBL024W 2055 nt2.53□□□□□ -2
RIX1P38883 YDR186CYDR186C 2634 nt2.53□□□□□ -2
RIX1P38883 RRT15YLR162W-A 189 nt2.53□□□□□ -2
RIX1P38883 RPL38YLR325C 237 nt2.53□□□□□ -2
RIX1P38883 NEO1YIL048W 3456 nt2.53□□□□□ -2
RIX1P38883 YDR524C-AYDR524C-A 120 nt2.52□□□□□ -2.01
RIX1P38883 YBR224WYBR224W 516 nt2.52□□□□□ -2.01
RIX1P38883 KAR3YPR141C 2190 nt2.51□□□□□ -2.01
RIX1P38883 SSN2YDR443C 4263 nt2.51□□□□□ -2.01
RIX1P38883 YGL069CYGL069C 465 nt2.51□□□□□ -2.01
RIX1P38883 RAM2YKL019W 951 nt2.51□□□□□ -2.01
RIX1P38883 RGM1YMR182C 636 nt2.51□□□□□ -2.01
RIX1P38883 RRP12YPL012W 3687 nt2.51□□□□□ -2.01
RIX1P38883 TIM9YEL020W-A 264 nt2.5□□□□□ -2.01
RIX1P38883 VTC1YER072W 390 nt2.5□□□□□ -2.01
RIX1P38883 YGL024WYGL024W 336 nt2.5□□□□□ -2.01
RIX1P38883 YGL217CYGL217C 342 nt2.5□□□□□ -2.01
RIX1P38883 SMD1YGR074W 441 nt2.5□□□□□ -2.01
RIX1P38883 FPR1YNL135C 345 nt2.5□□□□□ -2.01
RIX1P38883 LCD1YDR499W 2244 nt2.5□□□□□ -2.01
RIX1P38883 SPP41YDR464W 4308 nt2.49□□□□□ -2.01
RIX1P38883 LRE1YCL051W 1752 nt2.49□□□□□ -2.01
RIX1P38883 snR76snR76 109 nt2.49□□□□□ -2.01
RIX1P38883 YAL042C-AYAL042C-A 378 nt2.49□□□□□ -2.01
RIX1P38883 YML007C-AYML007C-A 111 nt2.49□□□□□ -2.01
RIX1P38883 YNL097C-BYNL097C-B 123 nt2.49□□□□□ -2.01
RIX1P38883 SNU114YKL173W 3027 nt2.49□□□□□ -2.01
RIX1P38883 PDE2YOR360C 1581 nt2.49□□□□□ -2.01
RIX1P38883 YPP1YGR198W 2454 nt2.48□□□□□ -2.01
RIX1P38883 GCV2YMR189W 3105 nt2.48□□□□□ -2.01
RIX1P38883 YDR426CYDR426C 378 nt2.48□□□□□ -2.01
RIX1P38883 DNF1YER166W 4716 nt2.48□□□□□ -2.01
RIX1P38883 ASG1YIL130W 2895 nt2.48□□□□□ -2.01
RIX1P38883 PSO2YMR137C 1986 nt2.48□□□□□ -2.01
RIX1P38883 YBT1YLL048C 4986 nt2.48□□□□□ -2.01
RIX1P38883 ORC1YML065W 2745 nt2.48□□□□□ -2.01
RIX1P38883 snR70snR70 164 nt2.47□□□□□ -2.01
RIX1P38883 SSS1YDR086C 243 nt2.47□□□□□ -2.01
RIX1P38883 ERP6YGL002W 651 nt2.47□□□□□ -2.01
RIX1P38883 YLR255CYLR255C 354 nt2.47□□□□□ -2.01
RIX1P38883 YOR376WYOR376W 369 nt2.47□□□□□ -2.01
RIX1P38883 DFG16YOR030W 1860 nt2.47□□□□□ -2.01
RIX1P38883 DOT6YER088C 2013 nt2.47□□□□□ -2.01
RIX1P38883 CDC27YBL084C 2277 nt2.46□□□□□ -2.02
RIX1P38883 INA22YIR024C 651 nt2.46□□□□□ -2.02
RIX1P38883 YML037CYML037C 1023 nt2.46□□□□□ -2.02
RIX1P38883 YOR055WYOR055W 435 nt2.46□□□□□ -2.02
RIX1P38883 YBR182C-AYBR182C-A 195 nt2.46□□□□□ -2.02
RIX1P38883 snR46snR46 197 nt2.46□□□□□ -2.02
RIX1P38883 CUL3YGR003W 2235 nt2.46□□□□□ -2.02
RIX1P38883 GCN2YDR283C 4980 nt2.46□□□□□ -2.02
RIX1P38883 PDR1YGL013C 3207 nt2.45□□□□□ -2.02
RIX1P38883 PRE4YFR050C 801 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)G1tW(CCA)G1 72 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)G2tW(CCA)G2 72 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)JtW(CCA)J 72 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)KtW(CCA)K 72 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)MtW(CCA)M 72 nt2.45□□□□□ -2.02
RIX1P38883 tW(CCA)PtW(CCA)P 72 nt2.45□□□□□ -2.02
RIX1P38883 TRX1YLR043C 312 nt2.45□□□□□ -2.02
RIX1P38883 RTC6YPL183W-A 282 nt2.45□□□□□ -2.02
RIX1P38883 NUT2YPR168W 474 nt2.45□□□□□ -2.02
RIX1P38883 snR52snR52 92 nt2.45□□□□□ -2.02
RIX1P38883 YJL070CYJL070C 2667 nt2.45□□□□□ -2.02
RIX1P38883 NAB6YML117W 3405 nt2.45□□□□□ -2.02
RIX1P38883 TOF2YKR010C 2316 nt2.45□□□□□ -2.02
RIX1P38883 SAP185YJL098W 3177 nt2.45□□□□□ -2.02
RIX1P38883 SEC5YDR166C 2916 nt2.45□□□□□ -2.02
RIX1P38883 GUP1YGL084C 1683 nt2.44□□□□□ -2.02
RIX1P38883 PSK2YOL045W 3306 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms