Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN7P35236 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN7P35236 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN7P35236 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN7P35236 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
PTPN7P35236 AC016405.3-201ENST00000607710 860 ntBASIC20.92■□□□□ 0.94
PTPN7P35236 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN7P35236 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN7P35236 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN7P35236 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN7P35236 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN7P35236 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN7P35236 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN7P35236 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PTPN7P35236 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN7P35236 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN7P35236 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN7P35236 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PTPN7P35236 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
PTPN7P35236 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPN7P35236 AC100791.3-201ENST00000617619 330 ntBASIC20.91■□□□□ 0.94
PTPN7P35236 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN7P35236 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN7P35236 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PTPN7P35236 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PTPN7P35236 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN7P35236 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPN7P35236 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN7P35236 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN7P35236 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.9■□□□□ 0.94
PTPN7P35236 MFSD11-216ENST00000590393 1141 ntBASIC20.9■□□□□ 0.94
PTPN7P35236 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN7P35236 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN7P35236 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTPN7P35236 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN7P35236 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.89■□□□□ 0.94
PTPN7P35236 TMEM179-206ENST00000616017 1645 ntBASIC20.89■□□□□ 0.94
PTPN7P35236 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN7P35236 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN7P35236 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN7P35236 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN7P35236 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.89■□□□□ 0.93
PTPN7P35236 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PTPN7P35236 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN7P35236 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN7P35236 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN7P35236 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN7P35236 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN7P35236 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN7P35236 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN7P35236 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PTPN7P35236 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN7P35236 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPN7P35236 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN7P35236 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PTPN7P35236 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN7P35236 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PTPN7P35236 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 AC125437.2-201ENST00000625180 2167 ntBASIC20.88■□□□□ 0.93
PTPN7P35236 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN7P35236 KRT18P5-201ENST00000436075 1291 ntBASIC20.88■□□□□ 0.93
PTPN7P35236 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 AC137761.2-201ENST00000561729 223 ntBASIC20.88■□□□□ 0.93
PTPN7P35236 AC145350.3-201ENST00000569033 163 ntBASIC20.88■□□□□ 0.93
PTPN7P35236 AL691432.2-201ENST00000607222 2038 ntBASIC20.88■□□□□ 0.93
PTPN7P35236 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN7P35236 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN7P35236 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms