Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
LAMA1P25391 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LAMA1P25391 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.94■□□□□ 0.78
LAMA1P25391 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.94■□□□□ 0.78
LAMA1P25391 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LAMA1P25391 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.94■□□□□ 0.78
LAMA1P25391 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.94■□□□□ 0.78
LAMA1P25391 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
LAMA1P25391 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.94■□□□□ 0.78
LAMA1P25391 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LAMA1P25391 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.94■□□□□ 0.78
LAMA1P25391 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.94■□□□□ 0.78
LAMA1P25391 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.93■□□□□ 0.78
LAMA1P25391 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.93■□□□□ 0.78
LAMA1P25391 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.93■□□□□ 0.78
LAMA1P25391 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.93■□□□□ 0.78
LAMA1P25391 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 MMP23A-201ENST00000234610 1017 ntBASIC19.93■□□□□ 0.78
LAMA1P25391 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
LAMA1P25391 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LAMA1P25391 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LAMA1P25391 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LAMA1P25391 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.92■□□□□ 0.78
LAMA1P25391 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.92■□□□□ 0.78
LAMA1P25391 AL356652.1-201ENST00000615962 565 ntBASIC19.92■□□□□ 0.78
LAMA1P25391 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.92■□□□□ 0.78
LAMA1P25391 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LAMA1P25391 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.91■□□□□ 0.78
LAMA1P25391 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.91■□□□□ 0.78
LAMA1P25391 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.91■□□□□ 0.78
LAMA1P25391 AL353807.1-201ENST00000427475 662 ntBASIC19.91■□□□□ 0.78
LAMA1P25391 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.91■□□□□ 0.78
LAMA1P25391 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.91■□□□□ 0.78
LAMA1P25391 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
LAMA1P25391 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
LAMA1P25391 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.91■□□□□ 0.78
LAMA1P25391 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.91■□□□□ 0.78
LAMA1P25391 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LAMA1P25391 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA1P25391 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LAMA1P25391 AL031963.3-201ENST00000606441 850 ntBASIC19.91■□□□□ 0.78
LAMA1P25391 AC133561.1-201ENST00000568600 2415 ntBASIC19.91■□□□□ 0.78
LAMA1P25391 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 AL590326.2-201ENST00000625139 305 ntBASIC19.9■□□□□ 0.78
LAMA1P25391 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA1P25391 AL121603.2-201ENST00000557373 2117 ntBASIC19.9■□□□□ 0.78
LAMA1P25391 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMA1P25391 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.89■□□□□ 0.78
LAMA1P25391 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
LAMA1P25391 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.89■□□□□ 0.78
LAMA1P25391 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.89■□□□□ 0.78
LAMA1P25391 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.89■□□□□ 0.78
LAMA1P25391 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.89■□□□□ 0.78
LAMA1P25391 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.89■□□□□ 0.78
LAMA1P25391 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMA1P25391 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMA1P25391 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMA1P25391 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 AL390955.1-201ENST00000428694 934 ntBASIC19.89■□□□□ 0.77
LAMA1P25391 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.89■□□□□ 0.77
LAMA1P25391 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA1P25391 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms