Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 YER088C-AYER088C-A 324 nt1.93□□□□□ -2.1
VMA16P23968 YGR174W-AYGR174W-A 87 nt1.93□□□□□ -2.1
VMA16P23968 ATG9YDL149W 2994 nt1.93□□□□□ -2.1
VMA16P23968 CAT2YML042W 2013 nt1.93□□□□□ -2.1
VMA16P23968 PXA2YKL188C 2562 nt1.92□□□□□ -2.1
VMA16P23968 YCR102W-AYCR102W-A 198 nt1.92□□□□□ -2.1
VMA16P23968 YDL240C-AYDL240C-A 138 nt1.92□□□□□ -2.1
VMA16P23968 PSY1YKL076C 384 nt1.92□□□□□ -2.1
VMA16P23968 PAU18YLL064C 363 nt1.92□□□□□ -2.1
VMA16P23968 PAU6YNR076W 363 nt1.92□□□□□ -2.1
VMA16P23968 MGA2YIR033W 3342 nt1.92□□□□□ -2.1
VMA16P23968 SSQ1YLR369W 1974 nt1.91□□□□□ -2.1
VMA16P23968 MCM22YJR135C 720 nt1.91□□□□□ -2.1
VMA16P23968 MRPL31YKL138C 396 nt1.91□□□□□ -2.1
VMA16P23968 YLR146W-AYLR146W-A 189 nt1.91□□□□□ -2.1
VMA16P23968 YOR055WYOR055W 435 nt1.91□□□□□ -2.1
VMA16P23968 MSB1YOR188W 3414 nt1.91□□□□□ -2.1
VMA16P23968 YOR343W-BYOR343W-B 5313 nt1.9□□□□□ -2.1
VMA16P23968 TDA9YML081W 3756 nt1.9□□□□□ -2.11
VMA16P23968 tW(UCA)QtW(UCA)Q 74 nt1.9□□□□□ -2.11
VMA16P23968 ABM1YJR108W 372 nt1.9□□□□□ -2.11
VMA16P23968 YCL046WYCL046W 324 nt1.9□□□□□ -2.11
VMA16P23968 HDA3YPR179C 1968 nt1.9□□□□□ -2.11
VMA16P23968 NOP53YPL146C 1368 nt1.89□□□□□ -2.11
VMA16P23968 YAL059C-AYAL059C-A 423 nt1.89□□□□□ -2.11
VMA16P23968 PDR8YLR266C 2106 nt1.89□□□□□ -2.11
VMA16P23968 YOR072W-AYOR072W-A 249 nt1.89□□□□□ -2.11
VMA16P23968 BIL1YOR304C-A 231 nt1.89□□□□□ -2.11
VMA16P23968 GCN2YDR283C 4980 nt1.89□□□□□ -2.11
VMA16P23968 SGS1YMR190C 4344 nt1.89□□□□□ -2.11
VMA16P23968 CFT2YLR115W 2580 nt1.89□□□□□ -2.11
VMA16P23968 PET309YLR067C 2898 nt1.88□□□□□ -2.11
VMA16P23968 PAC1YOR269W 1485 nt1.88□□□□□ -2.11
VMA16P23968 snR70snR70 164 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)G1tW(CCA)G1 72 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)G2tW(CCA)G2 72 nt1.88□□□□□ -2.11
VMA16P23968 YIL059CYIL059C 366 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)JtW(CCA)J 72 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)KtW(CCA)K 72 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)MtW(CCA)M 72 nt1.88□□□□□ -2.11
VMA16P23968 tW(CCA)PtW(CCA)P 72 nt1.88□□□□□ -2.11
VMA16P23968 YPL225WYPL225W 441 nt1.88□□□□□ -2.11
VMA16P23968 HIR3YJR140C 4947 nt1.88□□□□□ -2.11
VMA16P23968 INO80YGL150C 4470 nt1.87□□□□□ -2.11
VMA16P23968 PDR3YBL005W 2931 nt1.87□□□□□ -2.11
VMA16P23968 MSC6YOR354C 2079 nt1.87□□□□□ -2.11
VMA16P23968 SWI5YDR146C 2130 nt1.87□□□□□ -2.11
VMA16P23968 NUT2YPR168W 474 nt1.87□□□□□ -2.11
VMA16P23968 PDR11YIL013C 4236 nt1.86□□□□□ -2.11
VMA16P23968 SGO1YOR073W 1773 nt1.86□□□□□ -2.11
VMA16P23968 YGR265WYGR265W 411 nt1.86□□□□□ -2.11
VMA16P23968 YHL041WYHL041W 450 nt1.86□□□□□ -2.11
VMA16P23968 YHR032W-AYHR032W-A 180 nt1.86□□□□□ -2.11
VMA16P23968 YHR073W-AYHR073W-A 177 nt1.86□□□□□ -2.11
VMA16P23968 YAF9YNL107W 681 nt1.86□□□□□ -2.11
VMA16P23968 TIM18YOR297C 579 nt1.86□□□□□ -2.11
VMA16P23968 FMP23YBR047W 528 nt1.86□□□□□ -2.11
VMA16P23968 SLN1YIL147C 3663 nt1.86□□□□□ -2.11
VMA16P23968 ZRG17YNR039C 1818 nt1.86□□□□□ -2.11
VMA16P23968 TFC8YPL007C 1767 nt1.85□□□□□ -2.11
VMA16P23968 TBS1YBR150C 3285 nt1.85□□□□□ -2.11
VMA16P23968 FKS1YLR342W 5631 nt1.85□□□□□ -2.11
VMA16P23968 YDL118WYDL118W 381 nt1.85□□□□□ -2.11
VMA16P23968 HER1YOR227W 3741 nt1.85□□□□□ -2.11
VMA16P23968 YGR250CYGR250C 2346 nt1.85□□□□□ -2.11
VMA16P23968 STE11YLR362W 2154 nt1.85□□□□□ -2.11
VMA16P23968 YBP1YBR216C 2025 nt1.84□□□□□ -2.11
VMA16P23968 MSH5YDL154W 2706 nt1.84□□□□□ -2.11
VMA16P23968 YDR102CYDR102C 333 nt1.84□□□□□ -2.11
VMA16P23968 CYC7YEL039C 342 nt1.84□□□□□ -2.11
VMA16P23968 RPL40BYKR094C 387 nt1.84□□□□□ -2.11
VMA16P23968 YPL038W-AYPL038W-A 192 nt1.84□□□□□ -2.11
VMA16P23968 RKM1YPL208W 1752 nt1.84□□□□□ -2.12
VMA16P23968 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
VMA16P23968 KOG1YHR186C 4674 nt1.84□□□□□ -2.12
VMA16P23968 YFR016CYFR016C 3702 nt1.84□□□□□ -2.12
VMA16P23968 ATG11YPR049C 3537 nt1.84□□□□□ -2.12
VMA16P23968 LYS14YDR034C 2373 nt1.84□□□□□ -2.12
VMA16P23968 EFR3YMR212C 2349 nt1.83□□□□□ -2.12
VMA16P23968 HCS1YKL017C 2052 nt1.83□□□□□ -2.12
VMA16P23968 YDR003W-AYDR003W-A 123 nt1.83□□□□□ -2.12
VMA16P23968 CSN9YDR179C 489 nt1.83□□□□□ -2.12
VMA16P23968 YMR141W-AYMR141W-A 225 nt1.83□□□□□ -2.12
VMA16P23968 TOR1YJR066W 7413 nt1.83□□□□□ -2.12
VMA16P23968 NUP170YBL079W 4509 nt1.83□□□□□ -2.12
VMA16P23968 PUT3YKL015W 2940 nt1.83□□□□□ -2.12
VMA16P23968 EMP24YGL200C 612 nt1.82□□□□□ -2.12
VMA16P23968 YIL156W-BYIL156W-B 222 nt1.82□□□□□ -2.12
VMA16P23968 UPS1YLR193C 528 nt1.82□□□□□ -2.12
VMA16P23968 SAR1YPL218W 573 nt1.82□□□□□ -2.12
VMA16P23968 UFD4YKL010C 4452 nt1.81□□□□□ -2.12
VMA16P23968 RFX1YLR176C 2436 nt1.81□□□□□ -2.12
VMA16P23968 SWI6YLR182W 2412 nt1.81□□□□□ -2.12
VMA16P23968 YHR007C-AYHR007C-A 216 nt1.81□□□□□ -2.12
VMA16P23968 YOP1YPR028W 543 nt1.81□□□□□ -2.12
VMA16P23968 snR43snR43 209 nt1.81□□□□□ -2.12
VMA16P23968 CTR9YOL145C 3234 nt1.81□□□□□ -2.12
VMA16P23968 MVP1YMR004W 1536 nt1.81□□□□□ -2.12
VMA16P23968 SEC63YOR254C 1992 nt1.8□□□□□ -2.12
VMA16P23968 YEL057CYEL057C 702 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms