Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA2P20248 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCNA2P20248 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19■□□□□ 0.63
CCNA2P20248 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA2P20248 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19■□□□□ 0.63
CCNA2P20248 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19■□□□□ 0.63
CCNA2P20248 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNA2P20248 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCNA2P20248 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA2P20248 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA2P20248 AC112907.3-201ENST00000577781 2400 ntBASIC18.99■□□□□ 0.63
CCNA2P20248 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.99■□□□□ 0.63
CCNA2P20248 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNA2P20248 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNA2P20248 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNA2P20248 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.99■□□□□ 0.63
CCNA2P20248 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA2P20248 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCNA2P20248 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCNA2P20248 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA2P20248 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA2P20248 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCNA2P20248 AC097381.1-201ENST00000429019 1296 ntBASIC18.98■□□□□ 0.63
CCNA2P20248 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA2P20248 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA2P20248 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA2P20248 AC008175.2-201ENST00000612840 297 ntBASIC18.98■□□□□ 0.63
CCNA2P20248 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
CCNA2P20248 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA2P20248 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 AP004607.4-201ENST00000530158 1459 ntBASIC18.97■□□□□ 0.63
CCNA2P20248 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA2P20248 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA2P20248 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCNA2P20248 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 AC027702.1-201ENST00000563810 1770 ntBASIC18.97■□□□□ 0.63
CCNA2P20248 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA2P20248 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNA2P20248 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA2P20248 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA2P20248 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA2P20248 AC116562.4-201ENST00000641316 2276 ntBASIC18.97■□□□□ 0.63
CCNA2P20248 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA2P20248 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 AC034268.1-201ENST00000441047 882 ntBASIC18.96■□□□□ 0.63
CCNA2P20248 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA2P20248 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA2P20248 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNA2P20248 AP001160.3-201ENST00000601484 763 ntBASIC18.96■□□□□ 0.63
CCNA2P20248 MIR6821-201ENST00000617625 74 ntBASIC18.96■□□□□ 0.63
CCNA2P20248 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCNA2P20248 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA2P20248 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA2P20248 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA2P20248 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA2P20248 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CCNA2P20248 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNA2P20248 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA2P20248 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms