Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 AC010536.3-201ENST00000620306 533 ntBASIC18.32■□□□□ 0.52
CD53P19397 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CD53P19397 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD53P19397 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.32■□□□□ 0.52
CD53P19397 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 AC055733.4-201ENST00000638462 1354 ntBASIC18.31■□□□□ 0.52
CD53P19397 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.31■□□□□ 0.52
CD53P19397 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD53P19397 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CD53P19397 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD53P19397 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CD53P19397 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CD53P19397 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CD53P19397 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CD53P19397 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.3■□□□□ 0.52
CD53P19397 AC093827.2-201ENST00000512654 315 ntBASIC18.3■□□□□ 0.52
CD53P19397 KRT18P20-201ENST00000548986 1279 ntBASIC18.3■□□□□ 0.52
CD53P19397 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.3■□□□□ 0.52
CD53P19397 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD53P19397 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
CD53P19397 AC008687.6-201ENST00000596318 630 ntBASIC18.3■□□□□ 0.52
CD53P19397 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.3■□□□□ 0.52
CD53P19397 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD53P19397 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD53P19397 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.3■□□□□ 0.52
CD53P19397 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD53P19397 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 AL512408.1-201ENST00000569378 2000 ntBASIC18.29■□□□□ 0.52
CD53P19397 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.29■□□□□ 0.52
CD53P19397 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 AC010141.2-201ENST00000452426 721 ntBASIC18.29■□□□□ 0.52
CD53P19397 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.29■□□□□ 0.52
CD53P19397 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.29■□□□□ 0.52
CD53P19397 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.29■□□□□ 0.52
CD53P19397 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.29■□□□□ 0.52
CD53P19397 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.29■□□□□ 0.52
CD53P19397 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD53P19397 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CD53P19397 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
CD53P19397 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.28■□□□□ 0.52
CD53P19397 POU5F1P3-201ENST00000428824 1078 ntBASIC18.28■□□□□ 0.52
CD53P19397 AC138907.5-202ENST00000569484 235 ntBASIC18.28■□□□□ 0.52
CD53P19397 MIR4758-201ENST00000577688 71 ntBASIC18.28■□□□□ 0.52
CD53P19397 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CD53P19397 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 AL391422.3-201ENST00000603791 2761 ntBASIC18.28■□□□□ 0.52
CD53P19397 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD53P19397 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
CD53P19397 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms