Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC2P18074 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC2P18074 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ERCC2P18074 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.83■□□□□ 0.93
ERCC2P18074 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.83■□□□□ 0.93
ERCC2P18074 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ERCC2P18074 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.83■□□□□ 0.93
ERCC2P18074 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC2P18074 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC2P18074 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ERCC2P18074 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC2P18074 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.83■□□□□ 0.92
ERCC2P18074 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC2P18074 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
ERCC2P18074 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC2P18074 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC2P18074 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.82■□□□□ 0.92
ERCC2P18074 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
ERCC2P18074 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ERCC2P18074 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ERCC2P18074 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC2P18074 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 SLC29A4P1-201ENST00000398760 971 ntBASIC20.81■□□□□ 0.92
ERCC2P18074 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC2P18074 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC2P18074 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC2P18074 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC2P18074 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.81■□□□□ 0.92
ERCC2P18074 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC2P18074 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ERCC2P18074 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
ERCC2P18074 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.8■□□□□ 0.92
ERCC2P18074 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ERCC2P18074 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 AC073130.3-201ENST00000624389 2278 ntBASIC20.8■□□□□ 0.92
ERCC2P18074 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ERCC2P18074 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ERCC2P18074 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC2P18074 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.79■□□□□ 0.92
ERCC2P18074 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.79■□□□□ 0.92
ERCC2P18074 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.79■□□□□ 0.92
ERCC2P18074 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
ERCC2P18074 C2orf69P4-201ENST00000565394 541 ntBASIC20.79■□□□□ 0.92
ERCC2P18074 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.79■□□□□ 0.92
ERCC2P18074 AL109923.1-201ENST00000618799 583 ntBASIC20.79■□□□□ 0.92
ERCC2P18074 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.79■□□□□ 0.92
ERCC2P18074 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.79■□□□□ 0.92
ERCC2P18074 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC2P18074 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.79■□□□□ 0.92
ERCC2P18074 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.79■□□□□ 0.92
ERCC2P18074 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.78■□□□□ 0.92
ERCC2P18074 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.78■□□□□ 0.92
ERCC2P18074 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
ERCC2P18074 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms