Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBL4AP11441 AC087633.2-202ENST00000565166 1439 ntBASIC18.66■□□□□ 0.58
UBL4AP11441 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 AC005181.1-201ENST00000604782 1256 ntBASIC18.66■□□□□ 0.58
UBL4AP11441 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.66■□□□□ 0.58
UBL4AP11441 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.66■□□□□ 0.58
UBL4AP11441 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.66■□□□□ 0.58
UBL4AP11441 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.66■□□□□ 0.58
UBL4AP11441 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
UBL4AP11441 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBL4AP11441 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
UBL4AP11441 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBL4AP11441 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.65■□□□□ 0.58
UBL4AP11441 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBL4AP11441 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBL4AP11441 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.65■□□□□ 0.58
UBL4AP11441 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.65■□□□□ 0.58
UBL4AP11441 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.65■□□□□ 0.58
UBL4AP11441 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.65■□□□□ 0.58
UBL4AP11441 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBL4AP11441 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBL4AP11441 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBL4AP11441 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBL4AP11441 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
UBL4AP11441 LETM1P2-201ENST00000597330 2178 ntBASIC18.65■□□□□ 0.58
UBL4AP11441 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
UBL4AP11441 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
UBL4AP11441 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.64■□□□□ 0.58
UBL4AP11441 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
UBL4AP11441 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBL4AP11441 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
UBL4AP11441 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.64■□□□□ 0.58
UBL4AP11441 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBL4AP11441 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.64■□□□□ 0.57
UBL4AP11441 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.64■□□□□ 0.57
UBL4AP11441 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBL4AP11441 AC100791.3-201ENST00000617619 330 ntBASIC18.64■□□□□ 0.57
UBL4AP11441 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.64■□□□□ 0.57
UBL4AP11441 AL020996.1-203ENST00000536896 2307 ntBASIC18.64■□□□□ 0.57
UBL4AP11441 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBL4AP11441 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.64■□□□□ 0.57
UBL4AP11441 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL4AP11441 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.63■□□□□ 0.57
UBL4AP11441 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
UBL4AP11441 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
UBL4AP11441 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 MCRIP2P1-201ENST00000394346 511 ntBASIC18.63■□□□□ 0.57
UBL4AP11441 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.63■□□□□ 0.57
UBL4AP11441 AL356652.1-201ENST00000615962 565 ntBASIC18.63■□□□□ 0.57
UBL4AP11441 OR10C1-204ENST00000622521 1039 ntBASIC18.63■□□□□ 0.57
UBL4AP11441 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.63■□□□□ 0.57
UBL4AP11441 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL4AP11441 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
UBL4AP11441 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms