Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.22■□□□□ 0.83
THRAP10827 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
THRAP10827 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.22■□□□□ 0.83
THRAP10827 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.22■□□□□ 0.83
THRAP10827 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 TSPY20P-201ENST00000450910 630 ntBASIC20.22■□□□□ 0.83
THRAP10827 MIR4758-201ENST00000577688 71 ntBASIC20.22■□□□□ 0.83
THRAP10827 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
THRAP10827 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.22■□□□□ 0.83
THRAP10827 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.22■□□□□ 0.83
THRAP10827 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.22■□□□□ 0.83
THRAP10827 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.22■□□□□ 0.83
THRAP10827 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
THRAP10827 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THRAP10827 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
THRAP10827 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.21■□□□□ 0.83
THRAP10827 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.21■□□□□ 0.83
THRAP10827 RBM17P2-201ENST00000616397 1405 ntBASIC20.21■□□□□ 0.83
THRAP10827 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
THRAP10827 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 MIPEPP3-201ENST00000412105 444 ntBASIC20.21■□□□□ 0.83
THRAP10827 AC093787.1-201ENST00000450396 207 ntBASIC20.21■□□□□ 0.83
THRAP10827 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
THRAP10827 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THRAP10827 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
THRAP10827 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
THRAP10827 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.2■□□□□ 0.82
THRAP10827 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
THRAP10827 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
THRAP10827 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.2■□□□□ 0.82
THRAP10827 AFG3L1P-217ENST00000557444 2447 ntBASIC20.2■□□□□ 0.82
THRAP10827 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
THRAP10827 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THRAP10827 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
THRAP10827 AL512625.2-201ENST00000417533 625 ntBASIC20.2■□□□□ 0.82
THRAP10827 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.2■□□□□ 0.82
THRAP10827 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.2■□□□□ 0.82
THRAP10827 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
THRAP10827 AC016405.3-201ENST00000607710 860 ntBASIC20.2■□□□□ 0.82
THRAP10827 TMEM191A-211ENST00000637163 1067 ntBASIC20.2■□□□□ 0.82
THRAP10827 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THRAP10827 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THRAP10827 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
THRAP10827 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THRAP10827 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
THRAP10827 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.19■□□□□ 0.82
THRAP10827 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.19■□□□□ 0.82
THRAP10827 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.19■□□□□ 0.82
THRAP10827 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.19■□□□□ 0.82
THRAP10827 AC243732.1-201ENST00000612648 864 ntBASIC20.19■□□□□ 0.82
THRAP10827 AC061975.6-201ENST00000579045 1553 ntBASIC20.19■□□□□ 0.82
THRAP10827 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
THRAP10827 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms