Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB3P0DN86 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CGB3P0DN86 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB3P0DN86 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB3P0DN86 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB3P0DN86 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CGB3P0DN86 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB3P0DN86 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.64■□□□□ 0.25
CGB3P0DN86 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB3P0DN86 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB3P0DN86 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB3P0DN86 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB3P0DN86 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.62■□□□□ 0.25
CGB3P0DN86 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB3P0DN86 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.62■□□□□ 0.25
CGB3P0DN86 KRT17P1-201ENST00000399211 1546 ntBASIC16.62■□□□□ 0.25
CGB3P0DN86 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CGB3P0DN86 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CGB3P0DN86 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB3P0DN86 AF201337.1-201ENST00000520239 748 ntBASIC16.62■□□□□ 0.25
CGB3P0DN86 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB3P0DN86 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CGB3P0DN86 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB3P0DN86 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.62■□□□□ 0.25
CGB3P0DN86 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.62■□□□□ 0.25
CGB3P0DN86 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB3P0DN86 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.62■□□□□ 0.25
CGB3P0DN86 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB3P0DN86 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 TCF3P1-201ENST00000423021 1937 ntBASIC16.61■□□□□ 0.25
CGB3P0DN86 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CGB3P0DN86 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 AL589743.5-201ENST00000616611 1050 ntBASIC16.61■□□□□ 0.25
CGB3P0DN86 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB3P0DN86 AL391422.3-201ENST00000603791 2761 ntBASIC16.61■□□□□ 0.25
CGB3P0DN86 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB3P0DN86 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB3P0DN86 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CGB3P0DN86 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB3P0DN86 BX119927.1-201ENST00000636596 1552 ntBASIC16.6■□□□□ 0.25
CGB3P0DN86 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB3P0DN86 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB3P0DN86 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB3P0DN86 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CGB3P0DN86 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGB3P0DN86 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB3P0DN86 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
CGB3P0DN86 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 SLC25A24-204ENST00000569674 2357 ntBASIC16.59■□□□□ 0.25
CGB3P0DN86 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 AC112907.3-201ENST00000577781 2400 ntBASIC16.59■□□□□ 0.25
CGB3P0DN86 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.59■□□□□ 0.25
CGB3P0DN86 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CGB3P0DN86 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CGB3P0DN86 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.59■□□□□ 0.25
CGB3P0DN86 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB3P0DN86 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms