Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 AC073210.2-201ENST00000430369 194 ntBASIC19.22■□□□□ 0.67
ZNF888P0CJ79 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 AC097658.1-201ENST00000475555 843 ntBASIC19.22■□□□□ 0.67
ZNF888P0CJ79 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.22■□□□□ 0.67
ZNF888P0CJ79 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF888P0CJ79 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 MYC-209ENST00000641252 345 ntBASIC19.21■□□□□ 0.67
ZNF888P0CJ79 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF888P0CJ79 LINC01006-201ENST00000333319 2292 ntBASIC19.21■□□□□ 0.67
ZNF888P0CJ79 DPP3P2-201ENST00000416030 1696 ntBASIC19.2■□□□□ 0.66
ZNF888P0CJ79 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 AC083880.1-201ENST00000608266 535 ntBASIC19.2■□□□□ 0.66
ZNF888P0CJ79 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF888P0CJ79 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 GABARAPL3-202ENST00000624044 1851 ntBASIC19.19■□□□□ 0.66
ZNF888P0CJ79 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF888P0CJ79 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF888P0CJ79 SMG8-203ENST00000578922 2178 ntBASIC19.17■□□□□ 0.66
ZNF888P0CJ79 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF888P0CJ79 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF888P0CJ79 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF888P0CJ79 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF888P0CJ79 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF888P0CJ79 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms