Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL1P09341 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CXCL1P09341 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL1P09341 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL1P09341 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL1P09341 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL1P09341 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.66■□□□□ 0.1
CXCL1P09341 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.66■□□□□ 0.1
CXCL1P09341 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 AC133637.1-201ENST00000624115 1537 ntBASIC15.66■□□□□ 0.1
CXCL1P09341 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 AL390961.4-201ENST00000623958 2535 ntBASIC15.66■□□□□ 0.1
CXCL1P09341 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL1P09341 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CXCL1P09341 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 AC079598.2-202ENST00000546624 1451 ntBASIC15.65■□□□□ 0.1
CXCL1P09341 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.65■□□□□ 0.1
CXCL1P09341 Z82202.1-201ENST00000623446 1880 ntBASIC15.65■□□□□ 0.1
CXCL1P09341 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL1P09341 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.65■□□□□ 0.1
CXCL1P09341 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.65■□□□□ 0.1
CXCL1P09341 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.65■□□□□ 0.1
CXCL1P09341 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.65■□□□□ 0.1
CXCL1P09341 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL1P09341 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CXCL1P09341 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.65■□□□□ 0.1
CXCL1P09341 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.65■□□□□ 0.1
CXCL1P09341 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL1P09341 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL1P09341 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CXCL1P09341 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CXCL1P09341 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL1P09341 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CXCL1P09341 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CXCL1P09341 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 AC012313.1-201ENST00000593393 3059 ntBASIC15.64■□□□□ 0.09
CXCL1P09341 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
CXCL1P09341 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCL1P09341 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCL1P09341 AL117332.1-201ENST00000622628 974 ntBASIC15.64■□□□□ 0.09
CXCL1P09341 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL1P09341 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCL1P09341 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL1P09341 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL1P09341 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL1P09341 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL1P09341 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL1P09341 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CXCL1P09341 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CXCL1P09341 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.63■□□□□ 0.09
CXCL1P09341 AL451085.2-201ENST00000605085 799 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms