Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2ABP04908 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 AL591742.1-201ENST00000604433 565 ntBASIC18.38■□□□□ 0.53
HIST1H2ABP04908 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2ABP04908 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 PGM5P4-201ENST00000421970 445 ntBASIC18.37■□□□□ 0.53
HIST1H2ABP04908 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2ABP04908 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2ABP04908 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2ABP04908 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms