Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 VMR1YHL035C 4779 nt2.51□□□□□ -2.01
CDC9P04819 MNE1YOR350C 1992 nt2.5□□□□□ -2.01
CDC9P04819 YOR296WYOR296W 3870 nt2.5□□□□□ -2.01
CDC9P04819 YCR043CYCR043C 384 nt2.5□□□□□ -2.01
CDC9P04819 YDL211CYDL211C 1119 nt2.5□□□□□ -2.01
CDC9P04819 YGR265WYGR265W 411 nt2.5□□□□□ -2.01
CDC9P04819 PAU8YAL068C 363 nt2.5□□□□□ -2.01
CDC9P04819 UPS1YLR193C 528 nt2.5□□□□□ -2.01
CDC9P04819 PAU20YOL161C 363 nt2.5□□□□□ -2.01
CDC9P04819 RPL33AYPL143W 324 nt2.5□□□□□ -2.01
CDC9P04819 snR43snR43 209 nt2.5□□□□□ -2.01
CDC9P04819 VPS8YAL002W 3825 nt2.5□□□□□ -2.01
CDC9P04819 PXA2YKL188C 2562 nt2.5□□□□□ -2.01
CDC9P04819 NOP53YPL146C 1368 nt2.49□□□□□ -2.01
CDC9P04819 RPH1YER169W 2391 nt2.49□□□□□ -2.01
CDC9P04819 YGR069WYGR069W 336 nt2.49□□□□□ -2.01
CDC9P04819 YIL032CYIL032C 357 nt2.49□□□□□ -2.01
CDC9P04819 PFF1YBR074W 2931 nt2.49□□□□□ -2.01
CDC9P04819 MUK1YPL070W 1839 nt2.49□□□□□ -2.01
CDC9P04819 AXL1YPR122W 3627 nt2.49□□□□□ -2.01
CDC9P04819 YCR102W-AYCR102W-A 198 nt2.48□□□□□ -2.01
CDC9P04819 YDR426CYDR426C 378 nt2.48□□□□□ -2.01
CDC9P04819 CYC7YEL039C 342 nt2.48□□□□□ -2.01
CDC9P04819 YLR154W-AYLR154W-A 186 nt2.48□□□□□ -2.01
CDC9P04819 YOR394C-AYOR394C-A 168 nt2.48□□□□□ -2.01
CDC9P04819 RPO41YFL036W 4056 nt2.47□□□□□ -2.01
CDC9P04819 TRX1YLR043C 312 nt2.47□□□□□ -2.01
CDC9P04819 YOR008C-AYOR008C-A 225 nt2.47□□□□□ -2.01
CDC9P04819 YPR002C-AYPR002C-A 198 nt2.47□□□□□ -2.01
CDC9P04819 SAP1YER047C 2694 nt2.47□□□□□ -2.01
CDC9P04819 SLY1YDR189W 2001 nt2.47□□□□□ -2.01
CDC9P04819 CFT2YLR115W 2580 nt2.47□□□□□ -2.01
CDC9P04819 SPG3YDR504C 384 nt2.46□□□□□ -2.02
CDC9P04819 HOP2YGL033W 657 nt2.46□□□□□ -2.02
CDC9P04819 RPS17AYML024W 411 nt2.46□□□□□ -2.02
CDC9P04819 YPR063CYPR063C 423 nt2.46□□□□□ -2.02
CDC9P04819 DNA2YHR164C 4569 nt2.46□□□□□ -2.02
CDC9P04819 SWI5YDR146C 2130 nt2.45□□□□□ -2.02
CDC9P04819 COG8YML071C 1824 nt2.45□□□□□ -2.02
CDC9P04819 ALG13YGL047W 609 nt2.45□□□□□ -2.02
CDC9P04819 YGL188C-AYGL188C-A 141 nt2.45□□□□□ -2.02
CDC9P04819 EMP24YGL200C 612 nt2.45□□□□□ -2.02
CDC9P04819 CLN3YAL040C 1743 nt2.45□□□□□ -2.02
CDC9P04819 FKS3YMR306W 5358 nt2.45□□□□□ -2.02
CDC9P04819 PTP3YER075C 2787 nt2.44□□□□□ -2.02
CDC9P04819 PHO2YDL106C 1680 nt2.44□□□□□ -2.02
CDC9P04819 TFC8YPL007C 1767 nt2.44□□□□□ -2.02
CDC9P04819 UBR1YGR184C 5853 nt2.44□□□□□ -2.02
CDC9P04819 YLR255CYLR255C 354 nt2.44□□□□□ -2.02
CDC9P04819 NEW1YPL226W 3591 nt2.44□□□□□ -2.02
CDC9P04819 SSQ1YLR369W 1974 nt2.43□□□□□ -2.02
CDC9P04819 TRL1YJL087C 2484 nt2.43□□□□□ -2.02
CDC9P04819 RAD61YDR014W 1944 nt2.43□□□□□ -2.02
CDC9P04819 INP2YMR163C 2118 nt2.43□□□□□ -2.02
CDC9P04819 YGR250CYGR250C 2346 nt2.43□□□□□ -2.02
CDC9P04819 SGS1YMR190C 4344 nt2.43□□□□□ -2.02
CDC9P04819 RFX1YLR176C 2436 nt2.42□□□□□ -2.02
CDC9P04819 YFH1YDL120W 525 nt2.42□□□□□ -2.02
CDC9P04819 CDC60YPL160W 3273 nt2.41□□□□□ -2.02
CDC9P04819 YDL062WYDL062W 426 nt2.41□□□□□ -2.02
CDC9P04819 CYB5YNL111C 363 nt2.41□□□□□ -2.02
CDC9P04819 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
CDC9P04819 PDR3YBL005W 2931 nt2.41□□□□□ -2.02
CDC9P04819 ESL2YKR096W 3588 nt2.4□□□□□ -2.03
CDC9P04819 MRP10YDL045W-A 288 nt2.4□□□□□ -2.03
CDC9P04819 BRP1YGL007W 378 nt2.4□□□□□ -2.03
CDC9P04819 tM(CAU)Q1tM(CAU)Q1 76 nt2.4□□□□□ -2.03
CDC9P04819 SIR3YLR442C 2937 nt2.4□□□□□ -2.03
CDC9P04819 RTT107YHR154W 3213 nt2.4□□□□□ -2.03
CDC9P04819 NUM1YDR150W 8247 nt2.39□□□□□ -2.03
CDC9P04819 INO80YGL150C 4470 nt2.39□□□□□ -2.03
CDC9P04819 TOR1YJR066W 7413 nt2.39□□□□□ -2.03
CDC9P04819 YRB1YDR002W 606 nt2.39□□□□□ -2.03
CDC9P04819 TIM9YEL020W-A 264 nt2.39□□□□□ -2.03
CDC9P04819 YHR073W-AYHR073W-A 177 nt2.39□□□□□ -2.03
CDC9P04819 YMR141W-AYMR141W-A 225 nt2.39□□□□□ -2.03
CDC9P04819 RPB10YOR210W 213 nt2.39□□□□□ -2.03
CDC9P04819 snR49snR49 165 nt2.39□□□□□ -2.03
CDC9P04819 YPL216WYPL216W 3309 nt2.39□□□□□ -2.03
CDC9P04819 LYS14YDR034C 2373 nt2.38□□□□□ -2.03
CDC9P04819 PHO91YNR013C 2685 nt2.38□□□□□ -2.03
CDC9P04819 MVP1YMR004W 1536 nt2.38□□□□□ -2.03
CDC9P04819 YEF3YLR249W 3135 nt2.38□□□□□ -2.03
CDC9P04819 BNR1YIL159W 4128 nt2.38□□□□□ -2.03
CDC9P04819 PAU18YLL064C 363 nt2.38□□□□□ -2.03
CDC9P04819 PAU6YNR076W 363 nt2.38□□□□□ -2.03
CDC9P04819 LCL1YPL056C 306 nt2.38□□□□□ -2.03
CDC9P04819 HCS1YKL017C 2052 nt2.38□□□□□ -2.03
CDC9P04819 YPL150WYPL150W 2706 nt2.38□□□□□ -2.03
CDC9P04819 ESC1YMR219W 4977 nt2.38□□□□□ -2.03
CDC9P04819 YDR341CYDR341C 1824 nt2.38□□□□□ -2.03
CDC9P04819 PLC1YPL268W 2610 nt2.37□□□□□ -2.03
CDC9P04819 snR60snR60 104 nt2.37□□□□□ -2.03
CDC9P04819 YEL020C-BYEL020C-B 198 nt2.37□□□□□ -2.03
CDC9P04819 SCW11YGL028C 1629 nt2.37□□□□□ -2.03
CDC9P04819 DCP2YNL118C 2913 nt2.37□□□□□ -2.03
CDC9P04819 PET309YLR067C 2898 nt2.36□□□□□ -2.03
CDC9P04819 RTT101YJL047C 2529 nt2.36□□□□□ -2.03
CDC9P04819 STE11YLR362W 2154 nt2.36□□□□□ -2.03
CDC9P04819 ARP7YPR034W 1434 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 49.1 ms