Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV2D-28P01615 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV2D-28P01615 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV2D-28P01615 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 AC011484.1-201ENST00000377652 1995 ntBASIC13.34□□□□□ -0.27
IGKV2D-28P01615 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 BX005040.4-201ENST00000637145 1518 ntBASIC13.34□□□□□ -0.27
IGKV2D-28P01615 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV2D-28P01615 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
IGKV2D-28P01615 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.33□□□□□ -0.27
IGKV2D-28P01615 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.33□□□□□ -0.27
IGKV2D-28P01615 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
IGKV2D-28P01615 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGKV2D-28P01615 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 AC126544.1-201ENST00000580842 1059 ntBASIC13.33□□□□□ -0.28
IGKV2D-28P01615 MIR4767-201ENST00000582827 78 ntBASIC13.33□□□□□ -0.28
IGKV2D-28P01615 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.33□□□□□ -0.28
IGKV2D-28P01615 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV2D-28P01615 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 AC026471.1-201ENST00000564629 3026 ntBASIC13.32□□□□□ -0.28
IGKV2D-28P01615 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV2D-28P01615 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms