Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLDN1O95832 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN1O95832 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.06■□□□□ 0.48
CLDN1O95832 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN1O95832 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN1O95832 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN1O95832 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN1O95832 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN1O95832 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN1O95832 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLDN1O95832 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN1O95832 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN1O95832 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN1O95832 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLDN1O95832 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN1O95832 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN1O95832 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN1O95832 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN1O95832 CYP21A1P-202ENST00000354927 1481 ntBASIC18.05■□□□□ 0.48
CLDN1O95832 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN1O95832 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN1O95832 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN1O95832 AC087742.1-201ENST00000575880 1738 ntBASIC18.04■□□□□ 0.48
CLDN1O95832 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN1O95832 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.04■□□□□ 0.48
CLDN1O95832 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 AL355355.2-201ENST00000442321 338 ntBASIC18.04■□□□□ 0.48
CLDN1O95832 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN1O95832 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN1O95832 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN1O95832 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 AC139530.1-201ENST00000575312 1977 ntBASIC18.04■□□□□ 0.48
CLDN1O95832 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CLDN1O95832 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN1O95832 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN1O95832 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CLDN1O95832 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN1O95832 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CLDN1O95832 AC080038.3-201ENST00000623346 1952 ntBASIC18.03■□□□□ 0.48
CLDN1O95832 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN1O95832 AC007322.3-201ENST00000426526 701 ntBASIC18.03■□□□□ 0.48
CLDN1O95832 KRT18P57-201ENST00000443599 1254 ntBASIC18.03■□□□□ 0.48
CLDN1O95832 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN1O95832 AC006557.6-201ENST00000623071 864 ntBASIC18.03■□□□□ 0.48
CLDN1O95832 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN1O95832 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN1O95832 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN1O95832 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN1O95832 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLDN1O95832 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLDN1O95832 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN1O95832 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN1O95832 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms