Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPBO95292 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
VAPBO95292 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPBO95292 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPBO95292 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.31■□□□□ 0.84
VAPBO95292 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.31■□□□□ 0.84
VAPBO95292 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VAPBO95292 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VAPBO95292 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
VAPBO95292 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPBO95292 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.31■□□□□ 0.84
VAPBO95292 CYP21A1P-202ENST00000354927 1481 ntBASIC20.3■□□□□ 0.84
VAPBO95292 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.3■□□□□ 0.84
VAPBO95292 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
VAPBO95292 AC087633.2-202ENST00000565166 1439 ntBASIC20.3■□□□□ 0.84
VAPBO95292 DPP3P2-201ENST00000416030 1696 ntBASIC20.3■□□□□ 0.84
VAPBO95292 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
VAPBO95292 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.3■□□□□ 0.84
VAPBO95292 PGM5P4-201ENST00000421970 445 ntBASIC20.3■□□□□ 0.84
VAPBO95292 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.3■□□□□ 0.84
VAPBO95292 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.3■□□□□ 0.84
VAPBO95292 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
VAPBO95292 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.3■□□□□ 0.84
VAPBO95292 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VAPBO95292 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
VAPBO95292 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAPBO95292 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.29■□□□□ 0.84
VAPBO95292 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
VAPBO95292 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAPBO95292 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.29■□□□□ 0.84
VAPBO95292 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.29■□□□□ 0.84
VAPBO95292 AL356652.1-201ENST00000615962 565 ntBASIC20.29■□□□□ 0.84
VAPBO95292 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.29■□□□□ 0.84
VAPBO95292 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.29■□□□□ 0.84
VAPBO95292 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VAPBO95292 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 AC068338.2-201ENST00000563278 1430 ntBASIC20.28■□□□□ 0.84
VAPBO95292 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 BID-214ENST00000617586 542 ntTSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
VAPBO95292 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VAPBO95292 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.28■□□□□ 0.84
VAPBO95292 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VAPBO95292 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
VAPBO95292 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
VAPBO95292 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
VAPBO95292 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 AC022517.1-201ENST00000592429 346 ntBASIC20.27■□□□□ 0.84
VAPBO95292 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VAPBO95292 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VAPBO95292 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.27■□□□□ 0.84
VAPBO95292 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
VAPBO95292 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VAPBO95292 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VAPBO95292 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms