Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL1O75677 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL1O75677 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RFPL1O75677 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.27■□□□□ 0.84
RFPL1O75677 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL1O75677 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
RFPL1O75677 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RFPL1O75677 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.27■□□□□ 0.83
RFPL1O75677 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
RFPL1O75677 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFPL1O75677 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
RFPL1O75677 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 AL355802.2-201ENST00000402069 882 ntBASIC20.26■□□□□ 0.83
RFPL1O75677 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.26■□□□□ 0.83
RFPL1O75677 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 SLC7A5P2-201ENST00000553010 536 ntBASIC20.26■□□□□ 0.83
RFPL1O75677 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 AL109923.1-201ENST00000618799 583 ntBASIC20.26■□□□□ 0.83
RFPL1O75677 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFPL1O75677 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFPL1O75677 AL158211.5-201ENST00000623583 2518 ntBASIC20.26■□□□□ 0.83
RFPL1O75677 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL1O75677 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL1O75677 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 AC116562.4-201ENST00000641316 2276 ntBASIC20.25■□□□□ 0.83
RFPL1O75677 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RFPL1O75677 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFPL1O75677 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RFPL1O75677 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RFPL1O75677 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFPL1O75677 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFPL1O75677 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
RFPL1O75677 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.25■□□□□ 0.83
RFPL1O75677 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL1O75677 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.25■□□□□ 0.83
RFPL1O75677 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RFPL1O75677 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RFPL1O75677 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 CROCCP5-201ENST00000436658 830 ntBASIC20.24■□□□□ 0.83
RFPL1O75677 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.24■□□□□ 0.83
RFPL1O75677 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.24■□□□□ 0.83
RFPL1O75677 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.24■□□□□ 0.83
RFPL1O75677 AC120498.10-201ENST00000621827 505 ntBASIC20.24■□□□□ 0.83
RFPL1O75677 RNF165-205ENST00000588679 2904 ntBASIC20.24■□□□□ 0.83
RFPL1O75677 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
RFPL1O75677 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
RFPL1O75677 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.24■□□□□ 0.83
RFPL1O75677 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL1O75677 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL1O75677 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.23■□□□□ 0.83
RFPL1O75677 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL1O75677 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL1O75677 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.23■□□□□ 0.83
RFPL1O75677 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.23■□□□□ 0.83
RFPL1O75677 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.23■□□□□ 0.83
RFPL1O75677 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.23■□□□□ 0.83
RFPL1O75677 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.23■□□□□ 0.83
RFPL1O75677 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL1O75677 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.23■□□□□ 0.83
RFPL1O75677 AC011767.1-201ENST00000617410 1153 ntBASIC20.23■□□□□ 0.83
RFPL1O75677 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RFPL1O75677 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RFPL1O75677 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms