Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP12O75317 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.65■□□□□ 0.9
USP12O75317 CNN2P6-201ENST00000439038 900 ntBASIC20.65■□□□□ 0.9
USP12O75317 MIR4651-201ENST00000582622 73 ntBASIC20.65■□□□□ 0.9
USP12O75317 AC013268.1-206ENST00000638368 961 ntBASIC20.65■□□□□ 0.9
USP12O75317 AC112229.1-201ENST00000639295 961 ntBASIC20.65■□□□□ 0.9
USP12O75317 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.65■□□□□ 0.9
USP12O75317 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP12O75317 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
USP12O75317 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP12O75317 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.64■□□□□ 0.9
USP12O75317 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.64■□□□□ 0.89
USP12O75317 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 FAM201B-201ENST00000458407 597 ntBASIC20.64■□□□□ 0.89
USP12O75317 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.64■□□□□ 0.89
USP12O75317 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP12O75317 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 AL162377.1-201ENST00000618844 1793 ntBASIC20.64■□□□□ 0.89
USP12O75317 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP12O75317 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.64■□□□□ 0.89
USP12O75317 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.64■□□□□ 0.89
USP12O75317 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
USP12O75317 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.63■□□□□ 0.89
USP12O75317 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.63■□□□□ 0.89
USP12O75317 AC069152.1-201ENST00000438030 544 ntBASIC20.63■□□□□ 0.89
USP12O75317 AF201337.1-201ENST00000520239 748 ntBASIC20.63■□□□□ 0.89
USP12O75317 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.63■□□□□ 0.89
USP12O75317 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 SMG8-203ENST00000578922 2178 ntBASIC20.63■□□□□ 0.89
USP12O75317 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP12O75317 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
USP12O75317 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP12O75317 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
USP12O75317 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.62■□□□□ 0.89
USP12O75317 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.62■□□□□ 0.89
USP12O75317 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.62■□□□□ 0.89
USP12O75317 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.62■□□□□ 0.89
USP12O75317 AC133041.1-202ENST00000642053 222 ntBASIC20.62■□□□□ 0.89
USP12O75317 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
USP12O75317 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.62■□□□□ 0.89
USP12O75317 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
USP12O75317 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP12O75317 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP12O75317 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP12O75317 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 AC007322.4-201ENST00000509611 723 ntBASIC20.61■□□□□ 0.89
USP12O75317 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 AC105036.2-201ENST00000569468 176 ntBASIC20.61■□□□□ 0.89
USP12O75317 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP12O75317 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
USP12O75317 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
USP12O75317 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP12O75317 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP12O75317 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
USP12O75317 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms