Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPHN1O60890 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
OPHN1O60890 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPHN1O60890 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.03■□□□□ 0.96
OPHN1O60890 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
OPHN1O60890 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 CYP2T1P-201ENST00000432607 1285 ntBASIC21.02■□□□□ 0.96
OPHN1O60890 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.02■□□□□ 0.96
OPHN1O60890 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.02■□□□□ 0.96
OPHN1O60890 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.02■□□□□ 0.96
OPHN1O60890 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.02■□□□□ 0.96
OPHN1O60890 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
OPHN1O60890 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPHN1O60890 AC116050.2-201ENST00000612102 1779 ntBASIC21.02■□□□□ 0.96
OPHN1O60890 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
OPHN1O60890 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
OPHN1O60890 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.01■□□□□ 0.95
OPHN1O60890 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.01■□□□□ 0.95
OPHN1O60890 AC008694.1-202ENST00000636953 945 ntBASIC21.01■□□□□ 0.95
OPHN1O60890 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.01■□□□□ 0.95
OPHN1O60890 AC068338.2-201ENST00000563278 1430 ntBASIC21.01■□□□□ 0.95
OPHN1O60890 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
OPHN1O60890 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OPHN1O60890 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OPHN1O60890 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
OPHN1O60890 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
OPHN1O60890 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 AC027702.1-201ENST00000563810 1770 ntBASIC21■□□□□ 0.95
OPHN1O60890 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21■□□□□ 0.95
OPHN1O60890 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21■□□□□ 0.95
OPHN1O60890 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21■□□□□ 0.95
OPHN1O60890 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
OPHN1O60890 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
OPHN1O60890 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21■□□□□ 0.95
OPHN1O60890 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPHN1O60890 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 RBM17P2-201ENST00000616397 1405 ntBASIC20.99■□□□□ 0.95
OPHN1O60890 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.99■□□□□ 0.95
OPHN1O60890 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 OR10C1-204ENST00000622521 1039 ntBASIC20.99■□□□□ 0.95
OPHN1O60890 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
OPHN1O60890 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
OPHN1O60890 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPHN1O60890 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPHN1O60890 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.98■□□□□ 0.95
OPHN1O60890 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPHN1O60890 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.98■□□□□ 0.95
OPHN1O60890 RPS2P52-201ENST00000469610 820 ntBASIC20.98■□□□□ 0.95
OPHN1O60890 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
OPHN1O60890 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.98■□□□□ 0.95
OPHN1O60890 AC069236.1-201ENST00000604339 616 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms