Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM13O60858 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM13O60858 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM13O60858 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 TMEM179-206ENST00000616017 1645 ntBASIC19.87■□□□□ 0.77
TRIM13O60858 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM13O60858 AL691432.2-201ENST00000607222 2038 ntBASIC19.87■□□□□ 0.77
TRIM13O60858 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM13O60858 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM13O60858 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 AC027612.3-201ENST00000413684 1047 ntBASIC19.87■□□□□ 0.77
TRIM13O60858 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM13O60858 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM13O60858 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM13O60858 KRT18P20-201ENST00000548986 1279 ntBASIC19.87■□□□□ 0.77
TRIM13O60858 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
TRIM13O60858 AC243732.1-201ENST00000612648 864 ntBASIC19.87■□□□□ 0.77
TRIM13O60858 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM13O60858 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM13O60858 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM13O60858 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRIM13O60858 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 LINC02228-203ENST00000641970 1355 ntBASIC19.86■□□□□ 0.77
TRIM13O60858 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM13O60858 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM13O60858 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 AC007322.3-201ENST00000426526 701 ntBASIC19.86■□□□□ 0.77
TRIM13O60858 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRIM13O60858 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM13O60858 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM13O60858 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM13O60858 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM13O60858 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM13O60858 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM13O60858 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM13O60858 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TRIM13O60858 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM13O60858 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM13O60858 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM13O60858 AC142381.2-201ENST00000566120 298 ntBASIC19.85■□□□□ 0.77
TRIM13O60858 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM13O60858 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM13O60858 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM13O60858 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM13O60858 BX119927.1-201ENST00000636596 1552 ntBASIC19.84■□□□□ 0.77
TRIM13O60858 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM13O60858 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM13O60858 AL139246.5-201ENST00000606645 996 ntBASIC19.84■□□□□ 0.77
TRIM13O60858 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM13O60858 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM13O60858 RBM17P2-201ENST00000616397 1405 ntBASIC19.84■□□□□ 0.77
TRIM13O60858 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM13O60858 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM13O60858 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM13O60858 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms