Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD2O60548 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXD2O60548 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD2O60548 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXD2O60548 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FOXD2O60548 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FOXD2O60548 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.33■□□□□ 0.85
FOXD2O60548 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FOXD2O60548 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FOXD2O60548 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXD2O60548 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD2O60548 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD2O60548 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXD2O60548 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
FOXD2O60548 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXD2O60548 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
FOXD2O60548 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 AC007322.3-201ENST00000426526 701 ntBASIC20.32■□□□□ 0.84
FOXD2O60548 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXD2O60548 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD2O60548 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXD2O60548 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD2O60548 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD2O60548 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD2O60548 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXD2O60548 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD2O60548 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD2O60548 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.31■□□□□ 0.84
FOXD2O60548 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXD2O60548 AC120498.8-201ENST00000614275 531 ntBASIC20.31■□□□□ 0.84
FOXD2O60548 AC105020.6-201ENST00000621523 1217 ntBASIC20.31■□□□□ 0.84
FOXD2O60548 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD2O60548 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD2O60548 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXD2O60548 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD2O60548 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXD2O60548 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
FOXD2O60548 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 KRASP1-201ENST00000407852 552 ntBASIC20.3■□□□□ 0.84
FOXD2O60548 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FOXD2O60548 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXD2O60548 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
FOXD2O60548 AC026471.5-201ENST00000615068 467 ntBASIC20.3■□□□□ 0.84
FOXD2O60548 AC005363.2-201ENST00000618631 242 ntBASIC20.3■□□□□ 0.84
FOXD2O60548 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FOXD2O60548 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD2O60548 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXD2O60548 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 TSPY15P-201ENST00000457163 923 ntBASIC20.29■□□□□ 0.84
FOXD2O60548 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXD2O60548 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
FOXD2O60548 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 AL353708.3-201ENST00000610272 989 ntBASIC20.29■□□□□ 0.84
FOXD2O60548 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXD2O60548 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
FOXD2O60548 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms