Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNX3O60493 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNX3O60493 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNX3O60493 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SNX3O60493 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX3O60493 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
SNX3O60493 SLC47A1P1-202ENST00000449666 945 ntBASIC19.9■□□□□ 0.78
SNX3O60493 BX119927.1-201ENST00000636596 1552 ntBASIC19.9■□□□□ 0.78
SNX3O60493 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX3O60493 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNX3O60493 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX3O60493 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX3O60493 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNX3O60493 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX3O60493 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX3O60493 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX3O60493 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 AC092171.4-201ENST00000609130 632 ntBASIC19.88■□□□□ 0.77
SNX3O60493 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX3O60493 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 AC005332.8-201ENST00000622750 2735 ntBASIC19.88■□□□□ 0.77
SNX3O60493 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX3O60493 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SNX3O60493 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX3O60493 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 LINC01465-201ENST00000408887 1940 ntBASIC19.87■□□□□ 0.77
SNX3O60493 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 AC012354.3-201ENST00000623734 483 ntBASIC19.87■□□□□ 0.77
SNX3O60493 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX3O60493 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SNX3O60493 AC061975.6-201ENST00000579045 1553 ntBASIC19.87■□□□□ 0.77
SNX3O60493 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX3O60493 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms