Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 AC007322.1-201ENST00000426983 750 ntBASIC20.22■□□□□ 0.83
PFDN6O15212 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.22■□□□□ 0.83
PFDN6O15212 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.22■□□□□ 0.83
PFDN6O15212 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PFDN6O15212 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN6O15212 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PFDN6O15212 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PFDN6O15212 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.21■□□□□ 0.83
PFDN6O15212 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 AC022517.1-201ENST00000592429 346 ntBASIC20.21■□□□□ 0.83
PFDN6O15212 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PFDN6O15212 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PFDN6O15212 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.21■□□□□ 0.83
PFDN6O15212 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.21■□□□□ 0.83
PFDN6O15212 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PFDN6O15212 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN6O15212 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN6O15212 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PFDN6O15212 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.2■□□□□ 0.82
PFDN6O15212 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.2■□□□□ 0.82
PFDN6O15212 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PFDN6O15212 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.2■□□□□ 0.82
PFDN6O15212 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PFDN6O15212 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 RARRES2P4-201ENST00000514074 484 ntBASIC20.2■□□□□ 0.82
PFDN6O15212 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.2■□□□□ 0.82
PFDN6O15212 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.2■□□□□ 0.82
PFDN6O15212 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.2■□□□□ 0.82
PFDN6O15212 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.2■□□□□ 0.82
PFDN6O15212 AL356652.1-201ENST00000615962 565 ntBASIC20.2■□□□□ 0.82
PFDN6O15212 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN6O15212 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.2■□□□□ 0.82
PFDN6O15212 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
PFDN6O15212 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 CYP21A1P-202ENST00000354927 1481 ntBASIC20.19■□□□□ 0.82
PFDN6O15212 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.19■□□□□ 0.82
PFDN6O15212 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.19■□□□□ 0.82
PFDN6O15212 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN6O15212 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PFDN6O15212 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN6O15212 AC068338.2-201ENST00000563278 1430 ntBASIC20.19■□□□□ 0.82
PFDN6O15212 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.18■□□□□ 0.82
PFDN6O15212 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PFDN6O15212 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PFDN6O15212 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms