Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP2A1O14983 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.23■■□□□ 1.31
ATP2A1O14983 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.23■■□□□ 1.31
ATP2A1O14983 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP2A1O14983 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP2A1O14983 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP2A1O14983 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP2A1O14983 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
ATP2A1O14983 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP2A1O14983 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP2A1O14983 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP2A1O14983 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP2A1O14983 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ATP2A1O14983 SNORA78-201ENST00000459373 127 ntBASIC23.22■■□□□ 1.31
ATP2A1O14983 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP2A1O14983 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP2A1O14983 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP2A1O14983 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP2A1O14983 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP2A1O14983 AC121338.2-201ENST00000622535 1744 ntBASIC23.22■■□□□ 1.31
ATP2A1O14983 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP2A1O14983 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.21■■□□□ 1.31
ATP2A1O14983 KRASP1-201ENST00000407852 552 ntBASIC23.21■■□□□ 1.31
ATP2A1O14983 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.21■■□□□ 1.31
ATP2A1O14983 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.21■■□□□ 1.31
ATP2A1O14983 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 AL121829.2-201ENST00000620908 328 ntBASIC23.21■■□□□ 1.31
ATP2A1O14983 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
ATP2A1O14983 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ATP2A1O14983 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ATP2A1O14983 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP2A1O14983 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP2A1O14983 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
ATP2A1O14983 AL135905.2-201ENST00000584934 1404 ntBASIC23.2■■□□□ 1.3
ATP2A1O14983 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP2A1O14983 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP2A1O14983 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP2A1O14983 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP2A1O14983 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ATP2A1O14983 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2A1O14983 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2A1O14983 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2A1O14983 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP2A1O14983 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2A1O14983 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ATP2A1O14983 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2A1O14983 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP2A1O14983 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2A1O14983 RARRES2P10-201ENST00000564312 460 ntBASIC23.19■■□□□ 1.3
ATP2A1O14983 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2A1O14983 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ATP2A1O14983 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATP2A1O14983 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
ATP2A1O14983 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP2A1O14983 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATP2A1O14983 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2A1O14983 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP2A1O14983 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2A1O14983 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP2A1O14983 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.18■■□□□ 1.3
ATP2A1O14983 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.18■■□□□ 1.3
ATP2A1O14983 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ATP2A1O14983 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2A1O14983 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms