Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.57■■□□□ 1.04
O00370 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
O00370 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.57■■□□□ 1.04
O00370 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.57■■□□□ 1.04
O00370 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.57■■□□□ 1.04
O00370 AL589743.5-201ENST00000616611 1050 ntBASIC21.57■■□□□ 1.04
O00370 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.57■■□□□ 1.04
O00370 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
O00370 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 GABARAPL3-202ENST00000624044 1851 ntBASIC21.56■■□□□ 1.04
O00370 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
O00370 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
O00370 SLC29A4P1-201ENST00000398760 971 ntBASIC21.56■■□□□ 1.04
O00370 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.56■■□□□ 1.04
O00370 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
O00370 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.56■■□□□ 1.04
O00370 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
O00370 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.56■■□□□ 1.04
O00370 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
O00370 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.56■■□□□ 1.04
O00370 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
O00370 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
O00370 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
O00370 HLA-L-209ENST00000420110 1011 ntBASIC21.55■■□□□ 1.04
O00370 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
O00370 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.55■■□□□ 1.04
O00370 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.55■■□□□ 1.04
O00370 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 PCDHAC2-203ENST00000615316 3011 ntBASIC21.55■■□□□ 1.04
O00370 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
O00370 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.54■■□□□ 1.04
O00370 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.54■■□□□ 1.04
O00370 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.54■■□□□ 1.04
O00370 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.54■■□□□ 1.04
O00370 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
O00370 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.54■■□□□ 1.04
O00370 ID1-201ENST00000376105 1233 ntBASIC21.54■■□□□ 1.04
O00370 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.54■■□□□ 1.04
O00370 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
O00370 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.54■■□□□ 1.04
O00370 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.54■■□□□ 1.04
O00370 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.54■■□□□ 1.04
O00370 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
O00370 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
O00370 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.53■■□□□ 1.04
O00370 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.53■■□□□ 1.04
O00370 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
O00370 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.53■■□□□ 1.04
O00370 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.53■■□□□ 1.04
O00370 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 LSM12P1-201ENST00000411836 588 ntBASIC21.53■■□□□ 1.04
O00370 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.53■■□□□ 1.04
O00370 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.53■■□□□ 1.04
O00370 AL138781.1-201ENST00000566567 1274 ntBASIC21.53■■□□□ 1.04
O00370 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
O00370 AC092118.2-201ENST00000613495 667 ntBASIC21.53■■□□□ 1.04
O00370 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.53■■□□□ 1.04
O00370 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
O00370 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.53■■□□□ 1.04
O00370 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms