Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 AL020996.1-203ENST00000536896 2307 ntBASIC18.67■□□□□ 0.58
TNFRSF11BO00300 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 AL354811.1-201ENST00000610286 706 ntBASIC18.67■□□□□ 0.58
TNFRSF11BO00300 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 AL355001.2-201ENST00000620617 1191 ntBASIC18.67■□□□□ 0.58
TNFRSF11BO00300 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF11BO00300 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 AF213884.3-201ENST00000563833 479 ntBASIC18.66■□□□□ 0.58
TNFRSF11BO00300 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 DPP3P2-201ENST00000416030 1696 ntBASIC18.66■□□□□ 0.58
TNFRSF11BO00300 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF11BO00300 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 MIR939-201ENST00000401314 82 ntBASIC18.65■□□□□ 0.58
TNFRSF11BO00300 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 AC091305.1-201ENST00000479476 895 ntBASIC18.65■□□□□ 0.58
TNFRSF11BO00300 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF11BO00300 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TNFRSF11BO00300 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.64■□□□□ 0.58
TNFRSF11BO00300 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNFRSF11BO00300 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 TMEM179-206ENST00000616017 1645 ntBASIC18.64■□□□□ 0.57
TNFRSF11BO00300 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 AC098818.2-201ENST00000564925 2320 ntBASIC18.64■□□□□ 0.57
TNFRSF11BO00300 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF11BO00300 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms