Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
H3BM21 AC006128.1-201ENST00000624704 1661 ntBASIC20.13■□□□□ 0.81
H3BM21 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
H3BM21 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
H3BM21 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.12■□□□□ 0.81
H3BM21 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 SOX15-203ENST00000570788 1093 ntBASIC20.12■□□□□ 0.81
H3BM21 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
H3BM21 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
H3BM21 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3BM21 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.12■□□□□ 0.81
H3BM21 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.12■□□□□ 0.81
H3BM21 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.11■□□□□ 0.81
H3BM21 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.11■□□□□ 0.81
H3BM21 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
H3BM21 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
H3BM21 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
H3BM21 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.11■□□□□ 0.81
H3BM21 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.11■□□□□ 0.81
H3BM21 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.11■□□□□ 0.81
H3BM21 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.11■□□□□ 0.81
H3BM21 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.11■□□□□ 0.81
H3BM21 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3BM21 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
H3BM21 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.1■□□□□ 0.81
H3BM21 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
H3BM21 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.1■□□□□ 0.81
H3BM21 UBE2SP1-201ENST00000450587 669 ntBASIC20.1■□□□□ 0.81
H3BM21 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.1■□□□□ 0.81
H3BM21 C2orf69P4-201ENST00000565394 541 ntBASIC20.1■□□□□ 0.81
H3BM21 FAM197Y4-202ENST00000622692 608 ntBASIC20.1■□□□□ 0.81
H3BM21 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
H3BM21 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
H3BM21 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3BM21 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
H3BM21 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
H3BM21 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
H3BM21 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.09■□□□□ 0.81
H3BM21 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.81
H3BM21 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
H3BM21 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
H3BM21 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.08■□□□□ 0.81
H3BM21 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
H3BM21 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
H3BM21 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.08■□□□□ 0.81
H3BM21 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.08■□□□□ 0.81
H3BM21 RPS2P4-201ENST00000476944 856 ntBASIC20.08■□□□□ 0.81
H3BM21 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
H3BM21 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.08■□□□□ 0.81
H3BM21 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.08■□□□□ 0.81
H3BM21 AL359736.2-201ENST00000621992 437 ntBASIC20.08■□□□□ 0.81
H3BM21 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
H3BM21 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H3BM21 AC027702.1-201ENST00000563810 1770 ntBASIC20.08■□□□□ 0.8
H3BM21 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.08■□□□□ 0.8
H3BM21 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms