Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 AC011484.1-201ENST00000377652 1995 ntBASIC18.41■□□□□ 0.54
NPIPA2E9PIF3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 UNC93B4-201ENST00000505679 747 ntBASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA2E9PIF3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
NPIPA2E9PIF3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.39■□□□□ 0.53
NPIPA2E9PIF3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 KRT17P3-201ENST00000420566 1262 ntBASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 PGM5P4-201ENST00000421970 445 ntBASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 C2orf69P4-201ENST00000565394 541 ntBASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 SOX15-203ENST00000570788 1093 ntBASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 AC087633.2-202ENST00000565166 1439 ntBASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA2E9PIF3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 AC006128.1-201ENST00000624704 1661 ntBASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms