Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 MTND4LP12-201ENST00000448237 295 ntBASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 KRT18P20-201ENST00000548986 1279 ntBASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 AC138907.5-202ENST00000569484 235 ntBASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 AC010326.4-201ENST00000604665 891 ntBASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.6■■□□□ 1.21
SPDYE4A6NLX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 MIR4651-201ENST00000582622 73 ntBASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SPDYE4A6NLX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AL034346.1-201ENST00000568244 1277 ntBASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AC013268.1-206ENST00000638368 961 ntBASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AC112229.1-201ENST00000639295 961 ntBASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SPDYE4A6NLX3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SPDYE4A6NLX3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SPDYE4A6NLX3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 CNN2P6-201ENST00000439038 900 ntBASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 RN7SL371P-201ENST00000578099 267 ntBASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.57■■□□□ 1.2
SPDYE4A6NLX3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 AC133552.2-202ENST00000575694 574 ntBASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 AC008694.1-202ENST00000636953 945 ntBASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms