Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 AL365209.1-201ENST00000624418 6473 ntBASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 TSPY26P-202ENST00000565928 3884 ntBASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCP4L1A6NKN8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.91■□□□□ 0.14
PCP4L1A6NKN8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 AC068880.1-201ENST00000507289 2297 ntBASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCP4L1A6NKN8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
PCP4L1A6NKN8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCP4L1A6NKN8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms