Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D3FA6NER0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.21■□□□□ 0.83
TBC1D3FA6NER0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 KRT8P36-201ENST00000489121 1440 ntBASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 AL023875.1-201ENST00000640777 796 ntBASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.2■□□□□ 0.82
TBC1D3FA6NER0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
TBC1D3FA6NER0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D3FA6NER0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 AC239809.2-201ENST00000415381 517 ntBASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 Z99916.2-201ENST00000604037 246 ntBASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D3FA6NER0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms