Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 NFIC-211ENST00000641145 8399 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 DUX4L18-201ENST00000553347 1267 ntBASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 U85056.1-201ENST00000616429 682 ntBASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-2A0A0B4J235 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 AC125437.2-201ENST00000625180 2167 ntBASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 KRT18P60-201ENST00000312876 1297 ntBASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 AC011484.1-201ENST00000377652 1995 ntBASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-2A0A0B4J235 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-2A0A0B4J235 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-2A0A0B4J235 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-2A0A0B4J235 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAV13-2A0A0B4J235 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-2A0A0B4J235 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms