Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 PGM5P4-201ENST00000421970 445 ntBASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 AC097381.1-201ENST00000429019 1296 ntBASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 AL512408.1-201ENST00000569378 2000 ntBASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 AC004854.2-201ENST00000608450 1441 ntBASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 LETM1P2-201ENST00000597330 2178 ntBASIC15.85■□□□□ 0.13
TRAV30A0A087WSZ9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV30A0A087WSZ9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV30A0A087WSZ9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV30A0A087WSZ9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV30A0A087WSZ9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV30A0A087WSZ9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAV30A0A087WSZ9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 AC019069.1-201ENST00000610008 1333 ntBASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV30A0A087WSZ9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms