Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 TNFSF15-201ENST00000374044 2789 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 RN7SKP50-201ENST00000364694 315 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AC008638.2-201ENST00000503840 715 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 IGLVIV-59-201ENST00000520218 250 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 SDHCP4-201ENST00000532834 510 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 SOD1P2-201ENST00000563903 451 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 TRAF6P1-201ENST00000429404 1558 ntBASIC8.51□□□□□ -1.05
LMO3Q8TAP4 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 MFSD8-227ENST00000641393 4069 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 MIR654-201ENST00000385199 81 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AL035467.1-201ENST00000403583 686 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 METTL8P1-201ENST00000428182 611 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RN7SL395P-201ENST00000462960 291 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RN7SL740P-201ENST00000467060 344 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RN7SL621P-201ENST00000472565 299 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 NDUFS5P2-201ENST00000484004 306 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RN7SL862P-201ENST00000491550 298 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AL109933.4-201ENST00000612111 157 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC8.5□□□□□ -1.05
LMO3Q8TAP4 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LMO3Q8TAP4 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms