Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 AL589743.5-201ENST00000616611 1050 ntBASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 AIRN-201ENST00000601203 4374 ntBASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 AL138781.1-201ENST00000566567 1274 ntBASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA3PQ9Y6N3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 AC087633.2-202ENST00000565166 1439 ntBASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 AC006128.1-201ENST00000624704 1661 ntBASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 AL157384.1-201ENST00000445995 2473 ntBASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA3PQ9Y6N3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCA3PQ9Y6N3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 AC092118.2-201ENST00000613495 667 ntBASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 AC133041.1-202ENST00000642053 222 ntBASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms