Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
CSNK1G3Q9Y6M4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G3Q9Y6M4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 AC012618.2-201ENST00000428058 849 ntBASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 AC006557.6-201ENST00000623071 864 ntBASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G3Q9Y6M4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 AC124016.1-201ENST00000609552 612 ntBASIC19.83■□□□□ 0.77
CSNK1G3Q9Y6M4 AC244015.2-201ENST00000616358 1861 ntBASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G3Q9Y6M4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms