Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 CD99P1-205ENST00000527459 561 ntBASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3AQ9Y6K1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 AC023632.3-201ENST00000521633 145 ntBASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DNMT3AQ9Y6K1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 RNA5SP413-201ENST00000516373 109 ntBASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3AQ9Y6K1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 AC092720.2-201ENST00000602388 1665 ntBASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
DNMT3AQ9Y6K1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 PNMA6B-201ENST00000538162 1200 ntBASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 AC092368.3-202ENST00000574180 1591 ntBASIC19.82■□□□□ 0.76
DNMT3AQ9Y6K1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms