Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB1Q9Y5F3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 AL157384.1-201ENST00000445995 2473 ntBASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 AC128676.1-201ENST00000454392 318 ntBASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 AC073314.1-201ENST00000568729 2216 ntBASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB1Q9Y5F3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 AL596275.1-201ENST00000423464 877 ntBASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 AC142381.4-202ENST00000563973 229 ntBASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 AC010980.2-201ENST00000587099 1412 ntBASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB1Q9Y5F3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB1Q9Y5F3 LINC01006-201ENST00000333319 2292 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms